BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0800.1
(114 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai... 58 8e-11
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai... 58 9e-11
AT1G18560.1 | BED zinc finger and hAT dimerization domain-contai... 50 5e-08
>AT3G42170.1 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
Length = 696
Score = 57.8 bits (138), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 19 DVLQWWRQNGIYYPLMQIMARDLLSPSASTVASESAFSACSRVLTDRRNQLNDDIFEAII 78
DVL WW+QN + YP + MARD+LS S A + F R + + + L + EA+I
Sbjct: 609 DVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALI 668
Query: 79 CVKDW 83
C ++W
Sbjct: 669 CAREW 673
>AT3G42170.2 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
Length = 674
Score = 57.8 bits (138), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 19 DVLQWWRQNGIYYPLMQIMARDLLSPSASTVASESAFSACSRVLTDRRNQLNDDIFEAII 78
DVL WW+QN + YP + MARD+LS S A + F R + + + L + EA+I
Sbjct: 587 DVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALI 646
Query: 79 CVKDW 83
C ++W
Sbjct: 647 CAREW 651
>AT1G18560.1 | BED zinc finger and hAT dimerization
domain-containing protein | Chr1:6385614-6388005 FORWARD
LENGTH=690 | 201606
Length = 690
Score = 50.1 bits (118), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 12 SINDDNSDVLQWWRQNGIYYPLMQIMARDLLSPSASTVASESAFSACSRVLTDRRNQLND 71
SI +DVL WW+ N YP + MARD L+ A++ A E F + ++ +
Sbjct: 577 SIVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPH 636
Query: 72 DIFEAIICVKDW 83
D +++IC++ W
Sbjct: 637 DSTQSVICIRSW 648