BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0890.1
(276 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 215 1e-63
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 215 1e-63
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 130 2e-36
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 85 6e-20
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 68 4e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 215 bits (548), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 174/343 (50%), Gaps = 83/343 (24%)
Query: 9 AMAKEISALESNGTWSVVDLPPGKRPIGCKWVYKIKFRPDGSIDRYKARLVAKGYIQIEG 68
AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ DG+I+RYKARLVAKGY Q EG
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160
Query: 69 LDYHDTFAPVAKLVKVCILLSTARIGGWTLHQLDVNNAFLQGDLHEEVFMKLPPAISTLK 128
+D+ +TF+PV KL V ++L+ + I +TLHQLD++NAFL GDL EE++MKLPP + +
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 129 ---------SFLDKT-FSLKNLGRLQYFLGIEVS-----------------RSSNGIFLC 161
+L K+ + LK R Q+FL V+ + + +FLC
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASR-QWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLC 279
Query: 162 QRKYTLDILNGS-----------------------------GLTGSRPPA---------- 182
Y DI+ S GL +R A
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339
Query: 183 ----------------FPMEQKLRLSPSDGDSLHDPSVYRHLIGRLLYLTVTRPDISYAV 226
PM+ + S G D YR LIGRL+YL +TR DIS+AV
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV 399
Query: 227 NNLSQFLQHPTHVHLDATHRILRYLKGSLNHGLFLSATSSLHV 269
N LSQF + P H A +IL Y+KG++ GLF S+ + + +
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQL 442
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 215 bits (548), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 174/343 (50%), Gaps = 83/343 (24%)
Query: 9 AMAKEISALESNGTWSVVDLPPGKRPIGCKWVYKIKFRPDGSIDRYKARLVAKGYIQIEG 68
AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ DG+I+RYKARLVAKGY Q EG
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160
Query: 69 LDYHDTFAPVAKLVKVCILLSTARIGGWTLHQLDVNNAFLQGDLHEEVFMKLPPAISTLK 128
+D+ +TF+PV KL V ++L+ + I +TLHQLD++NAFL GDL EE++MKLPP + +
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 129 ---------SFLDKT-FSLKNLGRLQYFLGIEVS-----------------RSSNGIFLC 161
+L K+ + LK R Q+FL V+ + + +FLC
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASR-QWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLC 279
Query: 162 QRKYTLDILNGS-----------------------------GLTGSRPPA---------- 182
Y DI+ S GL +R A
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339
Query: 183 ----------------FPMEQKLRLSPSDGDSLHDPSVYRHLIGRLLYLTVTRPDISYAV 226
PM+ + S G D YR LIGRL+YL +TR DIS+AV
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV 399
Query: 227 NNLSQFLQHPTHVHLDATHRILRYLKGSLNHGLFLSATSSLHV 269
N LSQF + P H A +IL Y+KG++ GLF S+ + + +
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQL 442
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 130 bits (327), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Query: 131 LDKTFSLKNLGRLQYFLGIEVSRSSNGIFLCQRKYTLDILNGSGLTGSRPPAFPMEQKLR 190
L TFS+K+LG + YFLGI++ +G+FL Q KY ILN +G+ +P + P+ KL
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 191 LSPSDGDSLHDPSVYRHLIGRLLYLTVTRPDISYAVNNLSQFLQHPTHVHLDATHRILRY 250
S S DPS +R ++G L YLT+TRPDISYAVN + Q + PT D R+LRY
Sbjct: 87 SSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 145
Query: 251 LKGSLNHGLFLSATSSLHVSGYCGSD 276
+KG++ HGL++ S L+V +C SD
Sbjct: 146 VKGTIFHGLYIHKNSKLNVQAFCDSD 171
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 85.1 bits (209), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%)
Query: 1 MKSPHLRDAMAKEISALESNGTWSVVDLPPGKRPIGCKWVYKIKFRPDGSIDRYKARLVA 60
+K P AM +E+ AL N TW +V P + +GCKWV+K K DG++DR KARLVA
Sbjct: 35 LKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94
Query: 61 KGYIQIEGLDYHDTFAPVAKLVKVCILLSTAR 92
KG+ Q EG+ + +T++PV + + +L+ A+
Sbjct: 95 KGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 126
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.8 bits (164), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 213 LYLTVTRPDISYAVNNLSQFLQHPTHVHLDATHRILRYLKGSLNHGLFLSATSSLHVSGY 272
+YLT+TRPD+++AVN LSQF + A +++L Y+KG++ GLF SATS L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 273 CGSD 276
SD
Sbjct: 61 ADSD 64