BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1000.1
(176 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 60 1e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 53 2e-08
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 59.7 bits (143), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 48 NLPWAVIGDLNSILDPQEKSG--GKETSNSHLPKILNIIQLLGLVDLGCKGNPFTWTNRQ 105
N PW V+GD N I E S L + ++ LVDL C+G +TW+N Q
Sbjct: 119 NSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQ 178
Query: 106 LDGKLIQERLDRALVNEHWLKSFPDSSLSHLDTSGSDH 143
D +++ +LDRA+VN WL +FP +S S SDH
Sbjct: 179 QDNPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDH 215
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 53.1 bits (126), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 53 VIGDLNSILDPQEKSGGKETS--NSHLPKILNIIQLLGLVDLGCKGNPFTWTNRQLDGKL 110
++GD + I + +TS L + N ++ LVD+ +G +TW+N Q D +
Sbjct: 223 LVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPI 282
Query: 111 IQERLDRALVNEHWLKSFPDSSLSHLDTSG-SDHNPIFLSSINTSKKNQ 158
I+ +LDRA+ N W SFP S+++ + SG SDH+P + N K+++
Sbjct: 283 IR-KLDRAIANGDWFSSFP-SAIAVFELSGVSDHSPCIIILENLPKRSK 329