BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000102.1_g1020.1
         (128 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV...    60   3e-11

>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
           REVERSE LENGTH=777 | 201606
          Length = 777

 Score = 59.7 bits (143), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 15  KLKSDGWDKIFTELGQLFPGGAKAFRYALRQYSINTGHDFKFIKNDSKRVTVVCPVEDCK 74
           K ++  W    T +GQ F    + FR ALR+Y+I     F++ KNDS RVTV C  E C 
Sbjct: 193 KARTQQWQNTITGVGQRFKNVGE-FREALRKYAIANQFGFRYKKNDSHRVTVKCKAEGCP 251

Query: 75  WIVHGWTTLKCDSMFILKDMERKH 98
           W +H  + L    +  +K M   H
Sbjct: 252 WRIHA-SRLSTTQLICIKKMNPTH 274

Top