BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1040.1
(362 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32790.1 | CTC-interacting domain 11 | Chr1:11875174-11877188... 436 e-153
AT4G10610.1 | CTC-interacting domain 12 | Chr4:6557336-6559143 F... 416 e-146
AT1G32790.2 | CTC-interacting domain 11 | Chr1:11875028-11877188... 402 e-139
AT4G10610.2 | CTC-interacting domain 12 | Chr4:6557336-6559019 F... 391 e-136
AT3G49390.3 | CTC-interacting domain 10 | Chr3:18314901-18317658... 380 e-131
>AT1G32790.1 | CTC-interacting domain 11 | Chr1:11875174-11877188
REVERSE LENGTH=358 | 201606
Length = 358
Score = 436 bits (1120), Expect = e-153, Method: Compositional matrix adjust.
Identities = 217/295 (73%), Positives = 245/295 (83%), Gaps = 14/295 (4%)
Query: 82 GADLHRKEQVS--EGFQRDMRDLEELLSKLNPMAEEFVPPSLSNHG----------SVGA 129
G+ + R + V E F+RDMR+L+EL SKLNPMAEEFVPPSL+ G S G+
Sbjct: 64 GSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGS 123
Query: 130 AFYLNNF--LMQNSPGHGNTNLRKKIITSQGRRKMNARTSMAQREEIIRRTVYVSELDHQ 187
F N F G+ N R+K QG+R+MNARTSMAQRE++IRRTVYVS+LD Q
Sbjct: 124 FFRNNGFAGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQ 183
Query: 188 VTEEQLAALFINCGQVVDCRICGDPNSVLRFAFIEFTDEDGARAALSLAGTMLGYYPVRV 247
VTEEQLA LF++CGQVVDCRICGDPNSVLRFAFIEFTDE+GA AL+L+GTMLG+YPV+V
Sbjct: 184 VTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKV 243
Query: 248 LPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLL 307
LPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQ+DVKIFFES CGEVYRLRLL
Sbjct: 244 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLL 303
Query: 308 GDHQHSTRIAFVEFALADSATAALNCSGVVLGSLPIRVSPSKTPVRPRAPRTPMH 362
GD+QHSTRIAFVEF +A+SA AALNCSGVVLGSLPIRVSPSKTPVRPR+PR PMH
Sbjct: 304 GDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358
>AT4G10610.1 | CTC-interacting domain 12 | Chr4:6557336-6559143
FORWARD LENGTH=336 | 201606
Length = 336
Score = 416 bits (1069), Expect = e-146, Method: Compositional matrix adjust.
Identities = 205/277 (74%), Positives = 234/277 (84%), Gaps = 7/277 (2%)
Query: 93 EGFQRDMRDLEELLSKLNPMAEEFVPPSLSN---HGSVGAAFYLNNFLMQ--NSPGHGNT 147
E F+RDMR+L ELLSKLNPMA+EF+PPSL+ +G G F +NN + N P + +
Sbjct: 60 ESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDG 119
Query: 148 NLR-KKIITSQGRRKMNARTSMAQREEIIRRTVYVSELDHQVTEEQLAALFINCGQVVDC 206
+ R KK QG+R+MN RTS+AQREEIIRRTVYVS++D QVTEEQLA LFI GQVVDC
Sbjct: 120 SFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDC 179
Query: 207 RICGDPNSVLRFAFIEFTDEDGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSE 266
RICGDPNSVLRFAFIEFTDE GAR AL+L+GTMLG+YPV+V+PSKTAIAPVNPTFLPR+E
Sbjct: 180 RICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTE 239
Query: 267 DEREMCARTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLLGDHQHSTRIAFVEFALADS 326
DEREMCARTIYCTNIDKK+TQ D+K+FFESVCGEVYRLRLLGD+ H TRI FVEF +A+S
Sbjct: 240 DEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAES 299
Query: 327 ATAALNCSGVVLGSLPIRVSPSKTPVRPRA-PRTPMH 362
A AALNCSGV+LGSLPIRVSPSKTPVR RA PR MH
Sbjct: 300 AIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336
>AT1G32790.2 | CTC-interacting domain 11 | Chr1:11875028-11877188
REVERSE LENGTH=406 | 201606
Length = 406
Score = 402 bits (1034), Expect = e-139, Method: Compositional matrix adjust.
Identities = 202/279 (72%), Positives = 229/279 (82%), Gaps = 14/279 (5%)
Query: 82 GADLHRKEQVS--EGFQRDMRDLEELLSKLNPMAEEFVPPSLSNHG----------SVGA 129
G+ + R + V E F+RDMR+L+EL SKLNPMAEEFVPPSL+ G S G+
Sbjct: 64 GSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGS 123
Query: 130 AFYLNNF--LMQNSPGHGNTNLRKKIITSQGRRKMNARTSMAQREEIIRRTVYVSELDHQ 187
F N F G+ N R+K QG+R+MNARTSMAQRE++IRRTVYVS+LD Q
Sbjct: 124 FFRNNGFAGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQ 183
Query: 188 VTEEQLAALFINCGQVVDCRICGDPNSVLRFAFIEFTDEDGARAALSLAGTMLGYYPVRV 247
VTEEQLA LF++CGQVVDCRICGDPNSVLRFAFIEFTDE+GA AL+L+GTMLG+YPV+V
Sbjct: 184 VTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKV 243
Query: 248 LPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLL 307
LPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQ+DVKIFFES CGEVYRLRLL
Sbjct: 244 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLL 303
Query: 308 GDHQHSTRIAFVEFALADSATAALNCSGVVLGSLPIRVS 346
GD+QHSTRIAFVEF +A+SA AALNCSGVVLGSLPIR S
Sbjct: 304 GDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 274 RTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLLGDHQHSTRIAFVEFALADSATAALNC 333
RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF + A ALN
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 231
Query: 334 SGVVLGSLPIRVSPSKTPVRPRAP 357
SG +LG P++V PSKT + P P
Sbjct: 232 SGTMLGFYPVKVLPSKTAIAPVNP 255
>AT4G10610.2 | CTC-interacting domain 12 | Chr4:6557336-6559019
FORWARD LENGTH=326 | 201606
Length = 326
Score = 391 bits (1004), Expect = e-136, Method: Compositional matrix adjust.
Identities = 190/258 (73%), Positives = 219/258 (84%), Gaps = 6/258 (2%)
Query: 93 EGFQRDMRDLEELLSKLNPMAEEFVPPSLSN---HGSVGAAFYLNNFLMQ--NSPGHGNT 147
E F+RDMR+L ELLSKLNPMA+EF+PPSL+ +G G F +NN + N P + +
Sbjct: 60 ESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDG 119
Query: 148 NLR-KKIITSQGRRKMNARTSMAQREEIIRRTVYVSELDHQVTEEQLAALFINCGQVVDC 206
+ R KK QG+R+MN RTS+AQREEIIRRTVYVS++D QVTEEQLA LFI GQVVDC
Sbjct: 120 SFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDC 179
Query: 207 RICGDPNSVLRFAFIEFTDEDGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSE 266
RICGDPNSVLRFAFIEFTDE GAR AL+L+GTMLG+YPV+V+PSKTAIAPVNPTFLPR+E
Sbjct: 180 RICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTE 239
Query: 267 DEREMCARTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLLGDHQHSTRIAFVEFALADS 326
DEREMCARTIYCTNIDKK+TQ D+K+FFESVCGEVYRLRLLGD+ H TRI FVEF +A+S
Sbjct: 240 DEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAES 299
Query: 327 ATAALNCSGVVLGSLPIR 344
A AALNCSGV+LGSLPIR
Sbjct: 300 AIAALNCSGVLLGSLPIR 317
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 270 EMCARTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLLGDHQHSTRIAFVEFALADSATA 329
E+ RT+Y ++ID++VT+ + F G+V R+ GD R AF+EF A
Sbjct: 146 EIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIEFTDEVGART 204
Query: 330 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 357
ALN SG +LG P++V PSKT + P P
Sbjct: 205 ALNLSGTMLGFYPVKVMPSKTAIAPVNP 232
>AT3G49390.3 | CTC-interacting domain 10 | Chr3:18314901-18317658
REVERSE LENGTH=353 | 201606
Length = 353
Score = 380 bits (975), Expect = e-131, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 222/265 (83%), Gaps = 5/265 (1%)
Query: 98 DMRDLEELLSKLNPMAEEFVPPSL--SNHGSVGAAF-YLNNFLMQNSPGHGNTNL-RKKI 153
+++DL + SKLNPMA+EFVPPSL S G + + NNF GN + R++
Sbjct: 86 EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRNGLGFTNNFAAPPKLADGNDHFPRRRR 145
Query: 154 ITSQGRRKMNARTSMAQREEIIRRTVYVSELDHQVTEEQLAALFINCGQVVDCRICGDPN 213
QG+R+MN RTS+AQ++++IRRTVYVS++D QVTEE LA +FINCGQVVDCR+CGDPN
Sbjct: 146 SFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPN 205
Query: 214 SVLRFAFIEFTDEDGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCA 273
SVLRFAFIEFT+E+GARAALS++GT+LG+YP++VLPSKTAIAPVNPTFLPRSEDEREMC
Sbjct: 206 SVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCV 265
Query: 274 RTIYCTNIDKKVTQADVKIFFESVCGEVYRLRLLGDHQHSTRIAFVEFALADSATAALNC 333
RT+YCTNIDK++TQ D+K FFE +CGEV+RLR LGD+ H TRIAFVEFA+A+SA AAL+C
Sbjct: 266 RTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHC 324
Query: 334 SGVVLGSLPIRVSPSKTPVRPRAPR 358
SG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 325 SGIVLGALPIRVSPSKTPVRPHFPR 349