BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1200.1
(245 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 58 4e-10
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 55 7e-09
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 52 2e-07
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 1e-06
AT1G52990.2 | thioredoxin family protein | Chr1:19741201-1974344... 49 1e-06
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 58.2 bits (139), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 66 GTTTSSSTKKIIIANNNQMNWVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADHIAA 125
G T SS T K W P A ++K N D S + + G+ I+ + + +
Sbjct: 20 GQTKSSRTDK----------WQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDC 69
Query: 126 LADTTRG-QIAEECECQAIMWAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWKSGK 184
+G Q +E EC A++WA+Q A +L + + E DN+ + R + N T+ + +
Sbjct: 70 GCGKFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLRY-- 127
Query: 185 YMDIISILRDKFESIVFTHTSRQNNKQTDKQAK 217
Y++ I F ++ FT R+ N D AK
Sbjct: 128 YLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAK 160
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 86 WVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADHIAALADTTRGQIA-EECECQAIM 144
W PP +K N DAS + G+G I+ + + I +G++ EE EC ++
Sbjct: 105 WSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLI 164
Query: 145 WAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWKSGKYMDIISILRDKFESIVFTHT 204
WA+Q + + + E DN + R + N S + ++D I FESI F+
Sbjct: 165 WAIQASYGFGHKKVIFEGDNQTITRMI--NTKSSNPRLQHFLDTIQSWIPSFESIEFSFK 222
Query: 205 SRQNNKQTDKQAK 217
R+ N D AK
Sbjct: 223 HREQNGCADFLAK 235
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 85 NWVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADH-IAALADTTRGQIAEECECQAI 143
NW P ++K NVD SF + + P G I+ D + A A A ECE QA+
Sbjct: 502 NWRRPTNGWVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCIDNALECEFQAL 561
Query: 144 MWAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWKSGKYMDIISILRDKFESIVFTH 203
+ AMQ + I E DN + + N + + + ++ I KFE F
Sbjct: 562 LMAMQHCWSKGYRRICFEGDNKEMFDLI--NGLKMHFGAFNWIRDILWWASKFEQTQFQW 619
Query: 204 TSRQNNKQTDKQAK 217
T+RQNNK D A+
Sbjct: 620 TNRQNNKPADILAR 633
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 25/216 (11%)
Query: 20 WILQWKNLETEAVSLCEDSMI-------FMEARCEKCFSSKEQPPMQVIIKIKGTTTSSS 72
W+L NLE E L + + ++R E F KE +V+ + S
Sbjct: 59 WVL---NLEVEIPKLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWS 115
Query: 73 TKKII--------IANNNQMNWVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADHIA 124
T++ + + N + W P ++K N DA++ + GIG I+ ++ +
Sbjct: 116 TRRELEGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLW 175
Query: 125 ALADT-TRGQIAEECECQAIMWAMQWAAELKIQHIHIESDNLNLIRYLHNNN--TSIQWK 181
A R + E E +A+ WA+ + + I ESD L+ L++++ ++Q
Sbjct: 176 MGARALPRTKNVLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQ-- 233
Query: 182 SGKYMDIISILRDKFESIVFTHTSRQNNKQTDKQAK 217
++ I L FE + F T R NK D+ A+
Sbjct: 234 --PALEDIQQLLHHFEEVKFEFTPRGGNKVADRIAR 267
>AT1G52990.2 | thioredoxin family protein | Chr1:19741201-19743449
REVERSE LENGTH=243 | 201606
Length = 243
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Query: 94 IKINVDASFTSLSEPVGIGCIMHDDKADHIAALADTTRGQIA-EECECQAIMWAMQWAAE 152
+K N DAS G+G ++ + + + +G++ EE EC A++WA+Q +
Sbjct: 48 VKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSA 107
Query: 153 LKIQHIHIESDNLNLIRYLHNNNTSIQWKSGKYMDIISILRDKFESIVFTHTSRQNNKQT 212
+ E DN N+ R ++ + + + K Y+D I F S F T R+ N+
Sbjct: 108 FGYTKVIFEGDNSNVNRLINTKSDNPRLK--HYLDTIKSWIPSFTSTEFIFTHREQNQCA 165
Query: 213 DKQAK--------WGRINRCRRTWHSI 231
D K W N C + I
Sbjct: 166 DTLVKKAIKSSTQWSLFNCCPHFLYPI 192