BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1240.1
(506 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 112 4e-26
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 71 5e-13
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 112 bits (281), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 34/365 (9%)
Query: 124 DPWQTLVSLAPNNSLPWVIIGDLNTILH-PDEKTGGSRKVPTLVRGINSLINNL---GVR 179
DP +++ + L +++GD + I D + +P +RG+ N L +
Sbjct: 206 DPSVSVLVFKKTDQL-MILVGDFDQIAATSDHYSVLQTSIP--MRGLEEFQNCLRDSDLV 262
Query: 180 DVGFSGYPYTWSNRQFNGNLIQERLDRALTNDNWLIEFPDT-NLIHLPGVGSDHNPILLT 238
D+ G YTWSN Q + N I +LDRA+ N +W FP + L GV SDH+P ++
Sbjct: 263 DIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIII 320
Query: 239 TNPRPKLGPKPFKFIRTWMSHPECSQFIQEKWTFN-PAQIHMSLNRLAGHLSR------- 290
PK K F++ +HP + W P HM L HL
Sbjct: 321 LENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHM--FSLGEHLKAAKKCCKL 378
Query: 291 WNKEVFGHLDSKIKSLTNQLQRLRDK------DSVHRINKELEEAYN----QQESLWREK 340
N++ FG++ K K + L+ ++ + DS+ R+ + +N ES +R+K
Sbjct: 379 LNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQK 438
Query: 341 SRIDNIQLGDRNTKYFHSKAIHRGRKNQIMAIKKEDN----SWTNEQSEIASIFQTNLKQ 396
SRI +Q GD NT++FH + KN I ++ +D+ + T + I + + L
Sbjct: 439 SRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGS 498
Query: 397 ISTTNGQEAEITFLNLFSTQITEAQNTTITATPNKEEIKNAVFSLKPHAAPGPDGYPPYF 456
S ++ ++ + + + ++A P+ +EI AVF++ + APGPD + F
Sbjct: 499 DSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEF 558
Query: 457 YQANW 461
+ +W
Sbjct: 559 FWESW 563
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 17/241 (7%)
Query: 122 RMDPWQTLVSLAPNNSL---PWVIIGDLNTILHPDEKTGGSRKVPTL--VRGINSLINNL 176
R W + L+ ++ L PW+++GD N I E +L + + + + +
Sbjct: 101 RRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDS 160
Query: 177 GVRDVGFSGYPYTWSNRQFNGNLIQERLDRALTNDNWLIEFPDTNLIHLPGVGSDHNPIL 236
+ D+ G YTWSN Q N I +LDRA+ N WL FP + I P SDH +
Sbjct: 161 DLVDLPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACM 219
Query: 237 LTTNPRPKLG-PKPFKFIRTWMSHPECSQFIQEKWTFNPA--QIHMSLNRLAGHLSR--- 290
+ N P L K FK+ +HP+ I W A SL L +
Sbjct: 220 VILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKKACR 279
Query: 291 -WNKEVFGHLDSKIKSLTNQLQRLRDKDSVHRINKELEEAYNQQESLWREKSRIDNIQLG 349
N+ F ++ +++ ++N L + V R N A ES +++KSRI ++ G
Sbjct: 280 GLNRRGFSNIQAQL--MSNPSDFLFRAEHVARKNWNFFAA--ALESFYKQKSRIKWLKEG 335
Query: 350 D 350
D
Sbjct: 336 D 336