BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1250.1
(169 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 1e-08
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 51 1e-07
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292... 49 3e-07
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 48 1e-06
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 45 6e-06
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 53.5 bits (127), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 22 PYMTV--TVDASFTTAQESAGYGCVLTDEHSNFVIALADHI-RGQNSEECECLAILKALQ 78
PY V DA++ G G +L +E + A + R +N E E L+AL+
Sbjct: 141 PYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE----LEALR 196
Query: 79 WT----DQLRVKRILIKSDNQNLINIINSKKATIHWQS-EKHLDEIGKLKKNFDYIAFRH 133
W + KRI+ +SD Q L+N++NS W + + L++I +L +F+ + F
Sbjct: 197 WAVLTMSRFNYKRIIFESDAQALVNLLNSDD---FWPTLQPALEDIQQLLHHFEEVKFEF 253
Query: 134 ISRDNNKEADKLAK 147
R NK AD++A+
Sbjct: 254 TPRGGNKVADRIAR 267
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 4 HSLTTYKDIEQTETASEGPYMTVTVDASFTTAQESAGYGCVLTDEHSNFVIA---LADHI 60
H T I + G ++ VD SF G ++ D + + A + + I
Sbjct: 492 HGTTIRSHIPNWRRPTNG-WVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCI 550
Query: 61 RGQNSEECECLAILKALQ--WTDQLRVKRILIKSDNQNLINIINSKKATIHWQSEKHLDE 118
N+ ECE A+L A+Q W+ R RI + DN+ + ++IN K +H+ + + +
Sbjct: 551 --DNALECEFQALLMAMQHCWSKGYR--RICFEGDNKEMFDLINGLK--MHFGAFNWIRD 604
Query: 119 IGKLKKNFDYIAFRHISRDNNKEADKLAK 147
I F+ F+ +R NNK AD LA+
Sbjct: 605 ILWWASKFEQTQFQWTNRQNNKPADILAR 633
>AT3G09510.1 | Ribonuclease H-like superfamily protein |
Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
Length = 484
Score = 49.3 bits (116), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 23 YMTVTVDASFTTAQESAGYGCVLTDEHSNFV----IALADHIRGQNSEECECLAILKALQ 78
Y+ DA F + A G ++ + + + + LA N E E A+L ALQ
Sbjct: 333 YVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLA---HTSNPLEAETKALLAALQ 389
Query: 79 WTDQLRVKRILIKSDNQNLINIINSKKATIHWQSEKHLDEIGKLKKNFDYIAFRHISRDN 138
T ++ ++ D Q LIN+IN + H HL++I F I F I R
Sbjct: 390 QTWIRGYTQVFMEGDCQTLINLING--ISFHSSLANHLEDISFWANKFASIQFGFIRRKG 447
Query: 139 NKEADKLAKWG 149
NK A LAK+G
Sbjct: 448 NKLAHVLAKYG 458
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 24 MTVTVDASFTTAQESAGYGCVLTDEHSNFVIALADHIRGQ-NSEECECLAILKALQWTDQ 82
+ DAS +G G +L + + +G+ +EE EC ++ A+Q +
Sbjct: 113 LKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWAIQASYG 172
Query: 83 LRVKRILIKSDNQNLINIINSKKATIHWQSEKHLDEIGKLKKNFDYIAFRHISRDNNKEA 142
K+++ + DNQ + +IN+K + Q LD I +F+ I F R+ N A
Sbjct: 173 FGHKKVIFEGDNQTITRMINTKSSNPRLQ--HFLDTIQSWIPSFESIEFSFKHREQNGCA 230
Query: 143 DKLAK 147
D LAK
Sbjct: 231 DFLAK 235
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 45.1 bits (105), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 13 EQTETASEGP---YMTVTVDASFTTAQESAGYGCVLTDEHSNFVIALADHIRG--QNSEE 67
E T E P ++ D SF + G ++ D+ F A + G N+ E
Sbjct: 57 ESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDD-KGFYKGAAQAVGGTMNNALE 115
Query: 68 CECLAILKALQWTDQLRVKRILIKSDNQNLINIINSKKATIHWQSEKHLDEIGKLKKNFD 127
E A++ A+Q T ++++ + D++ + ++N K+ +H+ + + E K F+
Sbjct: 116 SELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQ--MHFGAFNWIREAWSWSKRFE 173
Query: 128 YIAFRHISRDNNKEADKLAK 147
+ F R NN+ AD LAK
Sbjct: 174 EVIFSWTPRTNNQPADMLAK 193