BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1260.1
(113 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 108 2e-30
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 5e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 5e-23
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 108 bits (271), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 3/109 (2%)
Query: 5 FVLVYVDDILFTGNSSSACDDLIKNLSSTFAMKDLGNLHYFLGMEVHRDASGLFLSQTKY 64
++L+YVDDIL TG+S++ + LI LSSTF+MKDLG +HYFLG+++ SGLFLSQTKY
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61
Query: 65 TLDLLNKAQMLDAKPCSSPLAHRFKLTPTEGTP-LEDPTHYRSLVGALH 112
+LN A MLD KP S+PL KL + T DP+ +RS+VGAL
Sbjct: 62 AEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQ 108
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 92.8 bits (229), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%)
Query: 6 VLVYVDDILFTGNSSSACDDLIKNLSSTFAMKDLGNLHYFLGMEVHRDASGLFLSQTKYT 65
VLVYVDDI+ N+ +A D+L L S F ++DLG L YFLG+E+ R A+G+ + Q KY
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339
Query: 66 LDLLNKAQMLDAKPCSSPLAHRFKLTPTEGTPLEDPTHYRSLVGAL 111
LDLL++ +L KP S P+ + G D YR L+G L
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRL 385
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 92.8 bits (229), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%)
Query: 6 VLVYVDDILFTGNSSSACDDLIKNLSSTFAMKDLGNLHYFLGMEVHRDASGLFLSQTKYT 65
VLVYVDDI+ N+ +A D+L L S F ++DLG L YFLG+E+ R A+G+ + Q KY
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339
Query: 66 LDLLNKAQMLDAKPCSSPLAHRFKLTPTEGTPLEDPTHYRSLVGAL 111
LDLL++ +L KP S P+ + G D YR L+G L
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRL 385