BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0010.1
(256 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 95 4e-22
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 81 3e-17
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 94.7 bits (234), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 29 NVAVDRRELWSELRRVADNY---DGPWLVMGDFNCVLKVEEKVG--GTGIQQGGLKEFRD 83
N +RR LW ++ R++ + + PWLV+GDFN + V E + I GL++ +
Sbjct: 96 NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155
Query: 84 CVDDTNLFDCPFTGSVFTWTNSQGGDRCISEKLDRALVNIEWSQEFTNAKAEFLHPGVSD 143
C+ D++L D P G ++TW+N Q D I KLDRA+VN W F A A F P SD
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQ-DNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSD 214
Query: 144 HSPCVVSLFEVER-TGPRPFKLVCKLKS----VRAALNGWKKGRFSEISAQMFGISEFPR 198
H+ C+V L + + FK L + + + L W+K + + MF + E +
Sbjct: 215 HAACMVILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKE--IAVGSFMFSLGELLK 272
Query: 199 ELPDLLKGI------EFETTLVDQEADMLIR 223
E +G+ + L+ +D L R
Sbjct: 273 EAKKACRGLNRRGFSNIQAQLMSNPSDFLFR 303
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 81.3 bits (199), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 53 LVMGDFNCVLKVEEK--VGGTGIQQGGLKEFRDCVDDTNLFDCPFTGSVFTWTNSQGGDR 110
+++GDF+ + + V T I GL+EF++C+ D++L D P G +TW+N Q D
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQD-DN 280
Query: 111 CISEKLDRALVNIEWSQEFTNAKAEFLHPGVSDHSPCVVSLFEVERTGPRPFK 163
I KLDRA+ N +W F +A A F GVSDHSPC++ L + + + F+
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFR 333