BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0070.1
(430 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 91 2e-19
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 84 3e-17
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 58 8e-09
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 46 5e-05
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 67 ATKNKGSSWASLFCPDDR------KYRAKLDYSPSPVSKEGEIPEINLNDFEDEIKECEN 120
ATK KGS+ + P+D + R L++ E E P I + + E+ E N
Sbjct: 22 ATKVKGSAGGGILKPEDVIDDEFVRERVGLEFPDG----EDEEPVITIGE---EVLEAMN 74
Query: 121 LL-----VGSFVGQRLPFSLVRRVLISRWRPKGEMFLTVYGESSYIIRFSLEEDRQRILE 175
L + +G ++P S++ R L W+P G M + ++IRF LEE+ L
Sbjct: 75 GLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALT 134
Query: 176 LEPVYIVNRLFFVRPWSLTIN---DDIASMKTLPIWICFRNVPMYLWNSIGLAMIASRLG 232
P ++ V+ WS + DDI T P+W+ N+P ++ L IA LG
Sbjct: 135 GGPWRVLGNYLLVQDWSSRFDPLRDDIV---TTPVWVRLSNIPYNYYHRCLLMEIARGLG 191
Query: 233 KPIMLDEPTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKCTGC 292
+P+ +D T + FARVCIE+ + + P + I + V Y C+ C
Sbjct: 192 RPLKVDMNTINFDKGRFARVCIEV--NLAKPLKGTVLINGDRYF---VAYEGLSKICSSC 246
Query: 293 GVFGH-------------SVGNYTTTAR---PIARENKEAASASMKEPEMQNAPI---VT 333
G++GH S G T T R P+ E + + + AP+ V
Sbjct: 247 GIYGHLVHSCPRNVVVKVSAGAETVTDRAVVPVGMEGDDGFTVVQRTARRPAAPVQKMVF 306
Query: 334 GTRAQGG 340
A GG
Sbjct: 307 AVGASGG 313
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 180 YIVNRLFFVRPWSLTINDDIASMKTLPIWICFRNVPMYLWNSIGLAMIASRLGKPIMLDE 239
++ + L FV PWS D+ + T+P+W+ +N+P L++ +G++ IAS LG P+ +
Sbjct: 214 HVDDCLMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYK 273
Query: 240 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKCTGCGVFGH 297
P S ++ A + +E+ + P I+ +NVEYAW P KC CG GH
Sbjct: 274 PRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGH 331
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 180 YIVNRLFFVRPWSLTINDDIASMKTLPIWICFRNVPMYLWNSIGLAMIASRLGKPIMLDE 239
++ + L FV WS N ++ + +P W+ +N+P L++ G+ IAS +G+ ++
Sbjct: 227 HVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSR 286
Query: 240 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKC 289
P +++ A++ +E+ D P+ ++ ++V Y+W P KC
Sbjct: 287 PWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKC 336
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 202 MKTLPIWICFRNVPMYLWNSIGLAMIASRLGKPIMLDEPTARRSRLAFARVCIEIPKDCS 261
++T W +NVP L++ G+++IAS +G+P+ ++ +R + R +++ +
Sbjct: 228 LQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEK--SRLGPVNIGRTKVKVVTNLG 285
Query: 262 MPKVISFTIPNAK--QIDINVEYAWKPLKCTGCGVFGHSVGNYTTTARPIARE---NKEA 316
P S + + + + V Y P KC CG +GH + ++P+ ++ K+
Sbjct: 286 TPLPDSIVVRDVQGNTARVAVTYPRPPPKCLNCGRYGHLLSR---CSKPLMKKLPFKKDL 342
Query: 317 ASASMKEPEMQNAPIVTGTRAQGGV 341
S S KE ++ + T AQ G+
Sbjct: 343 PSGS-KEVQILVISLPTSQEAQRGI 366