BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0120.1
(847 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 91 8e-19
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 81 2e-15
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 74 4e-13
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 73 7e-13
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 72 1e-12
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 702 NNTVRRRELWRDLEFLMMGP---EAPWLVLGDFNTTMLANEKRG---SNYSPSQGSNEMF 755
N RR LW D+ L +PWLV+GDFN E SN S QG ++
Sbjct: 96 NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNIS-LQGLEDLQ 154
Query: 756 DCVTDLGLFDCPFTDCFYTWSNRQMGAANVSTKIDRALINSGWLTCFPLAKADFPPPGDS 815
C+ D L D P YTWSN Q + K+DRA++N WL FP A A F PP DS
Sbjct: 155 ACMRDSDLVDLPCRGVLYTWSNHQQDNP-ILRKLDRAIVNGCWLATFPTASAIFDPPSDS 213
Query: 816 DHSPIIIPL-VAPNIHRRTLFRFFN 839
DH+ ++ L +P + ++ F++F+
Sbjct: 214 DHAACMVILNNSPPLSKKKSFKYFS 238
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 303 LFVVRQWKHNVEQELQELKTIPIWVCFRNIPLLLWNTKGISYIASVVGVPLMQDSRTESK 362
L V W +L E+ TIP+WV +NIP L++ GIS+IAS +G P+
Sbjct: 219 LMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYKPRLDP 278
Query: 363 ERMAFARVCVEVKVDKSLPDEVNIRVKEGSSDYMVKVQVEYSWKPDRCEGCQVFGHADSD 422
M+ A + VEV++ K+ P + K+G+ + V VEY+W P +C C GH S
Sbjct: 279 SLMSEANILVEVELSKAFPPRIAAVDKKGN---ISMVNVEYAWIPAKCGKCGQLGHKASR 335
Query: 423 CPK 425
C K
Sbjct: 336 CMK 338
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 236 FEDILIGSFVGERLGYGLVHSVLLKQWKLRGDMKLTVHGNSACVIKFSSSDDRRRALEHE 295
++ +I +G ++ +++ L + WK G M + +I+F ++ AL
Sbjct: 77 WKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGG 136
Query: 296 PIFIAGRLFVVRQWKHNVEQELQELKTIPIWVCFRNIPLLLWNTKGISYIASVVGVPLMQ 355
P + G +V+ W + ++ T P+WV NIP ++ + IA +G PL
Sbjct: 137 PWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKV 196
Query: 356 DSRTESKERMAFARVCVEVKVDKSLPDEVNIRVKEGSSDYMVKVQVEYSWKPDRCEGCQV 415
D T + ++ FARVC+EV + K L V I Y V Y C C +
Sbjct: 197 DMNTINFDKGRFARVCIEVNLAKPLKGTVLIN----GDRYFVA----YEGLSKICSSCGI 248
Query: 416 FGHADSDCPK 425
+GH CP+
Sbjct: 249 YGHLVHSCPR 258
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 290 RALEHEPIFIAGRLFVVRQWKHNVEQELQELKTIPIWVCFRNIPLLLWNTKGISYIASVV 349
RAL H + L V W E+ E+ IP W+ +NIP L++ KGI +IAS +
Sbjct: 223 RALWH----VDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGI 278
Query: 350 GVPLMQDSRTESKERMAFARVCVEVKVDKSLPDEVNIRVKEGSSDYMVKVQVEYSWKPDR 409
G ++ +M A++ VEVK+DK P V ++ + GS + V V YSW P +
Sbjct: 279 GETMLTSRPWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGS---ITMVDVVYSWLPSK 335
Query: 410 CEGCQVFGHADSDCPKQPKSFGHPTVPTSDT 440
C V ++ P S + + DT
Sbjct: 336 CLEKTVVSACNNGTPLNENSIVNASTKALDT 366
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 87/223 (39%), Gaps = 52/223 (23%)
Query: 629 STEEINKTRIPRRLHSSWTFIDNYVAVPGGRIWIGWDPSRVDLTVSHVGGQVITGGVRFP 688
S+ E N I SW NY GRIWI WDPS V + V Q++
Sbjct: 170 SSSESNAPAILDSTLPSWRLDTNYCCSELGRIWIVWDPS-VSVLVFKKTDQLM------- 221
Query: 689 DGSGFLLAVVYGSNNTVRRRELWRDLEFLMMGPEAPWLVLGDFNTTMLANEKRG--SNYS 746
+++GDF+ ++
Sbjct: 222 -------------------------------------ILVGDFDQIAATSDHYSVLQTSI 244
Query: 747 PSQGSNEMFDCVTDLGLFDCPFTDCFYTWSNRQMGAANVSTKIDRALINSGWLTCFPLAK 806
P +G E +C+ D L D P YTWSN Q + K+DRA+ N W + FP A
Sbjct: 245 PMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAI 303
Query: 807 ADFPPPGDSDHSPIIIPLVAPNIHRRT--LFRFFNAWTEDSTF 847
A F G SDHSP II + N+ +R+ FR+F+ + TF
Sbjct: 304 AVFELSGVSDHSPCII--ILENLPKRSKKCFRYFSFLSTHPTF 344