BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000106.1_g0200.1
         (250 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    77   9e-16
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1...    74   8e-15

>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 76.6 bits (187), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 48/209 (22%)

Query: 43  GNKDVVRRRLMPTWDWVANYEWDRAGRIWLLWDCSQVSLYVIPLSDHMVTAMVTMKDGRF 102
            N   +    +P+W    NY     GRIW++WD S VS+ V   +D ++           
Sbjct: 174 SNAPAILDSTLPSWRLDTNYCCSELGRIWIVWDPS-VSVLVFKKTDQLM----------- 221

Query: 103 FILSIVYAHNDGISRRRLWNEMRMVAINYDMAWIVMGDFNSVFEAGEKVGGAVVR-PCDT 161
                                            I++GDF+ +    +         P   
Sbjct: 222 ---------------------------------ILVGDFDQIAATSDHYSVLQTSIPMRG 248

Query: 162 LD-FRECIWDSHLFDCPYSGNLFTWSNGRSADGYIGEKLDRALVNIEWVSNFPNARAEFL 220
           L+ F+ C+ DS L D P  G  +TWSN +  D  I  KLDRA+ N +W S+FP+A A F 
Sbjct: 249 LEEFQNCLRDSDLVDIPSRGVHYTWSNHQD-DNPIIRKLDRAIANGDWFSSFPSAIAVFE 307

Query: 221 NHGVSDHCPCVVSLFETGGAGPRPLKFFN 249
             GVSDH PC++ L        +  ++F+
Sbjct: 308 LSGVSDHSPCIIILENLPKRSKKCFRYFS 336


>AT1G40390.1 | DNAse I-like superfamily protein |
           Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
          Length = 426

 Score = 73.9 bits (180), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 112 NDGISRRRLWNEMRMVAINYDM---AWIVMGDFNSVFEAGEKVG--GAVVRPCDTLDFRE 166
           N    RR LW+++  ++ +  +    W+V+GDFN +    E      + +      D + 
Sbjct: 96  NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155

Query: 167 CIWDSHLFDCPYSGNLFTWSNGRSADGYIGEKLDRALVNIEWVSNFPNARAEFLNHGVSD 226
           C+ DS L D P  G L+TWSN +  D  I  KLDRA+VN  W++ FP A A F     SD
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQ-DNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSD 214

Query: 227 HCPCVVSL 234
           H  C+V L
Sbjct: 215 HAACMVIL 222

Top