BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0220.1
(172 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORW... 56 3e-09
AT5G32590.1 | myosin heavy chain-like protein | Chr5:12221589-12... 50 3e-07
AT1G36100.1 | myosin heavy chain-like protein | Chr1:13494652-13... 48 6e-07
AT4G03830.1 | hypothetical protein (Protein of unknown function%... 45 2e-05
AT1G46696.1 | hypothetical protein (Protein of unknown function%... 44 2e-05
>AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORWARD
LENGTH=681 | 201606
Length = 681
Score = 55.8 bits (133), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 10 RADRMIPTTVELLLP----SPED----RICFTDNRRNGFYEVFFN-LGLVFPFPIFLVEL 60
R IP ++L+ P SPE C +E+FF+ GL FP P L++L
Sbjct: 34 RGAHQIPHQIKLISPGTKTSPESPPPGHTCA--------FEIFFSECGLFFPLPDILIDL 85
Query: 61 LNHYGLQLFQLSPNAVMTIMAIYFLCLQQGEKVSLYVFYKIFSVKSS-DRCWYYFSSRVG 119
++ +G+ L QL PN + T++ + L + G +++L F ++++VK S ++ S R G
Sbjct: 86 MHEFGIALPQLCPNVIRTVLCLLTLAEEDGFRLALSDFLQLYAVKKSRTNNTFFLSPRKG 145
>AT5G32590.1 | myosin heavy chain-like protein |
Chr5:12221589-12224322 REVERSE LENGTH=761 | 201606
Length = 761
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 15 IPTTVELLLPSPEDRICFTDNRRNGF--YEVFFN-LGLVFPFPIFLVELLNHYGLQLFQL 71
IP V L +PE D+R F YE++F GL FP P LV L + L QL
Sbjct: 52 IPAEVMKDLQTPEPTESPEDHRPGFFCVYEIYFKGCGLTFPLPEALVRYLAALEIALPQL 111
Query: 72 SPNAVMTIMAIYFLCLQQGEKVSLYVFYKIFSVKSSDRCWYYFSS 116
+PN + TI+ I + + G + + ++ +V+ S + YFS+
Sbjct: 112 TPNLLWTILGIITIAAEAGYVIGVPELNELLNVRRSSKKVGYFSA 156
>AT1G36100.1 | myosin heavy chain-like protein |
Chr1:13494652-13495215 FORWARD LENGTH=187 | 201606
Length = 187
Score = 47.8 bits (112), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 12 DRMIPTTVELLLPSPEDRICFTDNRRNGFY---EVFF-NLGLVFPFPIFLVELLNHYGLQ 67
D +P E SPED R GF+ E++F GL FP P LV L +
Sbjct: 59 DSQMPEPTE----SPEDH-------RPGFFCVNEIYFKGCGLTFPLPGALVRYLLALEIA 107
Query: 68 LFQLSPNAVMTIMAIYFLCLQQGEKVSLYVFYKIFSVKSSDRCWYYFS 115
L QL+PN + TI+ I + + G + + ++ SV+SS + YFS
Sbjct: 108 LPQLTPNLLRTILGIITIAAEAGYVIGVPELNELLSVRSSSKKVGYFS 155
>AT4G03830.1 | hypothetical protein (Protein of unknown function%2C
DUF601) | Chr4:1790440-1792458 FORWARD LENGTH=578 |
201606
Length = 578
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 15 IPTTVELLLPSPEDRICFTDNRRNGFYEVFFN-LGLVFPFPIFLVELLNHYGLQLFQLSP 73
IP + L+ P D +E+FF+ GL FP P L++ ++ +G+ L QL P
Sbjct: 39 IPGRINLISPEATDSPETPSPGHACAFEIFFSECGLYFPLPDILIDFMHEFGIALPQLCP 98
Query: 74 NAVMTIMAIYFLCLQQGEKVSLYVFYKIFSVKSS-DRCWYYFSSRVG--PFFSTPSIPKD 130
N + TI+++ L + +SL +++++K + ++ S R G F P +
Sbjct: 99 NVIRTILSLLTLAEEDNFLLSLPDLLQLYAIKKGRTQGTFFLSPRKGFRVFEDFPEKDEQ 158
Query: 131 YKEKFLFVR 139
+++ F F R
Sbjct: 159 WRKSFFFFR 167
>AT1G46696.1 | hypothetical protein (Protein of unknown function%2C
DUF601) | Chr1:17261860-17264183 REVERSE LENGTH=616 |
201606
Length = 616
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 14 MIPTTVELLLPSPEDRICFTDNRRNGF---YEVFFNL-GLVFPFPIFLVELLNHYGLQLF 69
IP ++L+ SPE +C +N G +E+FF+L GL FP P L++L++ +G+ L
Sbjct: 38 QIPRQIQLI--SPEPTVC-PENPPPGHTCAFEIFFSLCGLYFPLPDVLIDLMHEFGIALP 94
Query: 70 QLSPN--AVMT--IMAIYFLCLQQG 90
QL PN AV +FL ++G
Sbjct: 95 QLCPNLYAVKKGRTKGTFFLSPRKG 119