BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0300.1
(607 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 85 5e-17
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 80 2e-15
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 63 3e-10
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 62 1e-09
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 55 7e-08
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 207 LCENILVGSFVGERLAYGLVYSVLLKQWSPKGEMKLTVHGDSAYVIHFSSTEDRLRALEF 266
L + ++ +G ++ ++ L + W P G M + ++I F E+ + AL
Sbjct: 76 LWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTG 135
Query: 267 EPIFIAGRLFVVRPWRLNVEKELQEMKTIPLWVNLRNIPFLFWNLEGISNIASVLGVPLM 326
P + G +V+ W + ++ T P+WV L NIP+ +++ + IA LG PL
Sbjct: 136 GPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLK 195
Query: 327 QDSRTESRERMAFARVCVEVPVDTDLPDDITIRIEEGDSEYFVQVQVEYSWKPTKCEVCS 386
D T + ++ FARVC+EV + L + I GD YFV Y C C
Sbjct: 196 VDMNTINFDKGRFARVCIEVNLAKPLKGTVLI---NGD-RYFVA----YEGLSKICSSCG 247
Query: 387 IFGHDEGTCKKQPKPDVVTNVDEGGKS 413
I+GH +C + +VV V G ++
Sbjct: 248 IYGHLVHSCPR----NVVVKVSAGAET 270
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 275 LFVVRPWRLNVEKELQEMKTIPLWVNLRNIPFLFWNLEGISNIASVLGVPLMQDSRTESR 334
L V PW +L E+ TIP+WV L+NIP +++ GIS+IAS LG P+
Sbjct: 219 LMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYKPRLDP 278
Query: 335 ERMAFARVCVEVPVDTDLPDDITIRIEEGDSEYFVQVQVEYSWKPTKCEVCSIFGHDEGT 394
M+ A + VEV + P I ++G+ V VEY+W P KC C GH
Sbjct: 279 SLMSEANILVEVELSKAFPPRIAAVDKKGN---ISMVNVEYAWIPAKCGKCGQLGHKASR 335
Query: 395 CKK 397
C K
Sbjct: 336 CMK 338
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 288 ELQEMKTIPLWVNLRNIPFLFWNLEGISNIASVLGVPLMQDSRTESRERMAFARVCVEVP 347
E QE++T W L+N+P ++LEGIS IAS +G PL + + +V V
Sbjct: 224 EPQELQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEKSRLGPVNIGRTKVKVVTN 283
Query: 348 VDTDLPDDITIRIEEGDSEYFVQVQVEYSWKPTKCEVCSIFGHDEGTCKK 397
+ T LPD I +R +G++ +V V Y P KC C +GH C K
Sbjct: 284 LGTPLPDSIVVRDVQGNT---ARVAVTYPRPPPKCLNCGRYGHLLSRCSK 330
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 275 LFVVRPWRLNVEKELQEMKTIPLWVNLRNIPFLFWNLEGISNIASVLGVPLMQDSRTESR 334
L V W E+ E+ IP W+ L+NIP ++ +GI IAS +G ++
Sbjct: 232 LMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSRPWLDP 291
Query: 335 ERMAFARVCVEVPVDTDLPDDITIRIEEGDSEYFVQVQVEYSWKPTKC 382
+M A++ VEV +D P + ++ E G V V YSW P+KC
Sbjct: 292 TQMGEAKILVEVKLDKPFPQRVALKEECGS---ITMVDVVYSWLPSKC 336
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 280 PWRLN--------VEKELQEMKTIPLWVNLRNIPFLFWNLEGISNIASVLGVPLMQDSRT 331
PW N E ++ IP WV +R IPF F N + +I LG L D
Sbjct: 191 PWAFNDWMILLQRWEPQIPLFPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNV 250
Query: 332 ESRERMAFARVCVEVPVDTDLPDDITIRIEEGDSEYFVQVQVEYSWKPTKCEVCSIFGHD 391
E RM FARV + + L + G + ++ Y CEVC + HD
Sbjct: 251 EVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTL---LRFRYERLRGFCEVCGMLTHD 307
Query: 392 EGTCKKQ 398
G C Q
Sbjct: 308 FGACLIQ 314