BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0310.1
(285 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 91 3e-20
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 84 9e-18
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 90.5 bits (223), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 86 NNIVHRRELWRDLEFLGSEAP-----WLVLGDFNTTMLANEKRGGQSS--PSQGSNEMFD 138
N RR LW D+ L + +P WLV+GDFN E S QG ++
Sbjct: 96 NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155
Query: 139 CVTDLGLFDCPYTGCFNTWSNRQVGVANISCKIDRPLINSGWLTCFPLAKADFPPLGDSD 198
C+ D L D P G TWSN Q I K+DR ++N WL FP A A F P DSD
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQDNP-ILRKLDRAIVNGCWLATFPTASAIFDPPSDSD 214
Query: 199 HSPIIIPL-AAPNVHRLTPLRFFNAWTEDPTFRTLIADVWKVSVR-GNPMFRMVTKLKAL 256
H+ ++ L +P + + ++F+ + P F + I W+ + G+ MF + LK
Sbjct: 215 HAACMVILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEA 274
Query: 257 KARLNEWKKDRFNKVTNQVTIN 278
K + F+ + Q+ N
Sbjct: 275 KKACRGLNRRGFSNIQAQLMSN 296
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 83.6 bits (205), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 96/245 (39%), Gaps = 47/245 (19%)
Query: 16 ERNKTRIQRSLNPSWNFIDNYVVVPNGRIWIGWDPSRVDFTVSPVGGQVIAGGVRFPDGS 75
E N I S PSW NY GRIWI WDPS
Sbjct: 173 ESNAPAILDSTLPSWRLDTNYCCSELGRIWIVWDPS------------------------ 208
Query: 76 SFLLAVVYGSNNIVHRRELWRDLEFLGSEAPWLVLGDFNTTMLANEKRG--GQSSPSQGS 133
++V L F ++ +++GDF+ ++ S P +G
Sbjct: 209 ---VSV----------------LVFKKTDQLMILVGDFDQIAATSDHYSVLQTSIPMRGL 249
Query: 134 NEMFDCVTDLGLFDCPYTGCFNTWSNRQVGVANISCKIDRPLINSGWLTCFPLAKADFPP 193
E +C+ D L D P G TWSN Q I K+DR + N W + FP A A F
Sbjct: 250 EEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIR-KLDRAIANGDWFSSFPSAIAVFEL 308
Query: 194 LGDSDHSPIIIPLAAPNVHRLTPLRFFNAWTEDPTFRTLIADVWKVSV-RGNPMFRMVTK 252
G SDHSP II L R+F+ + PTF + W+ + G+ MF +
Sbjct: 309 SGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEH 368
Query: 253 LKALK 257
LKA K
Sbjct: 369 LKAAK 373