BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0350.1
(466 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 84 5e-17
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 81 5e-16
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 58 8e-09
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 56 4e-08
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 51 1e-06
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 53 DEKKVRSKLEFSPPTLNDAGVSEVSLDEFVEEIRDC-EKLLIGSFVGNRLGFPMVQRVLR 111
D++ VR ++ P D +E +E + +K +I +G+++ ++ R LR
Sbjct: 41 DDEFVRERVGLEFPDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLR 100
Query: 112 ARWKPKGEMVLTIHGDSAYIIRFALEEDRQRVLDMEPFFIAQRLFIVRPWELFIEEDVSS 171
WKP G M + ++IRF LEE+ L P+ + +V+ W +
Sbjct: 101 ELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDD 160
Query: 172 MDSLPVWVCLRNVPMFMWNPRGLARIASHIGKPIMLDEPTEKRTRTGYARVCVEISKDSL 231
+ + PVWV L N+P ++ L IA +G+P+ +D T + +ARVC+E+ +
Sbjct: 161 IVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEV--NLA 218
Query: 232 MPAVISFMVVGERKIDVKVEYAWKPLKCVNCGSFGHASNKC 272
P + ++ G+R V Y C +CG +GH + C
Sbjct: 219 KPLKGTVLINGDRYF---VAYEGLSKICSSCGIYGHLVHSC 256
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 155 LFIVRPWELFIEEDVSSMDSLPVWVCLRNVPMFMWNPRGLARIASHIGKPIMLDEPTEKR 214
L V PW D+ + ++PVWV L+N+P +++ G++ IAS +G P+ +P
Sbjct: 219 LMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYKPRLDP 278
Query: 215 TRTGYARVCVEISKDSLMPAVISFMVVGERKIDVKVEYAWKPLKCVNCGSFGHASNKCKL 274
+ A + VE+ P I+ + V VEYAW P KC CG GH +++C
Sbjct: 279 SLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHKASRCMK 338
Query: 275 PVRHNAQEK 283
P H A EK
Sbjct: 339 P--HLAHEK 345
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 177 VWVCLRNVPMFMWNPRGLARIASHIGKPIMLDEPTEKRTRTGYARVCVEISKDSLMPAVI 236
W L+NVP +++ G++ IAS IG+P+ ++ G +V V + + +P I
Sbjct: 233 TWAILKNVPPQLYSLEGISVIASGIGEPLHTEKSRLGPVNIGRTKVKVVTNLGTPLPDSI 292
Query: 237 SFMVVGERKIDVKVEYAWKPLKCVNCGSFGHASNKCKLPV 276
V V V Y P KC+NCG +GH ++C P+
Sbjct: 293 VVRDVQGNTARVAVTYPRPPPKCLNCGRYGHLLSRCSKPL 332
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 155 LFIVRPWELFIEEDVSSMDSLPVWVCLRNVPMFMWNPRGLARIASHIGKPIMLDEPTEKR 214
L V W +V + +P W+ L+N+P +++ +G+ IAS IG+ ++ P
Sbjct: 232 LMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSRPWLDP 291
Query: 215 TRTGYARVCVEISKDSLMPAVISFMVVGERKIDVKVEYAWKPLKCV 260
T+ G A++ VE+ D P ++ V V Y+W P KC+
Sbjct: 292 TQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKCL 337
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 14/192 (7%)
Query: 93 IGSFVGNRLGF------PMVQRVLRA------RWKPKGEMVLTIHGDSAYIIRFALEEDR 140
+G+ NRL P Q V RA +W ++ I D + +RF E D
Sbjct: 29 VGALASNRLSLLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDL 88
Query: 141 QRVLDMEPFFIAQRLFIVRPWELFIEEDVSSMDSLPVWVCLRNVPMFMWNPRGLARIASH 200
L P+ + ++ WE F ED + + VWV +R +P+ + R + IAS
Sbjct: 89 LNGLRRAPWVFNEWFIALQRWEDFPTEDFLTF--IDVWVHIRGIPLPYVSERTVEIIAST 146
Query: 201 IGKPIMLDEPTEKRTRTGYARVCVEISKDSLMPAVISFMVVGERKIDVKVEYAWKPLKCV 260
+G+ + +D E ++ + RV V + + + + EY C
Sbjct: 147 LGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIGFEYEKLQRVCT 206
Query: 261 NCGSFGHASNKC 272
NC H + C
Sbjct: 207 NCCRVNHQVSHC 218