BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0430.1
(252 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 81 3e-17
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 58 2e-09
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 55 3e-08
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 49 2e-06
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 80.9 bits (198), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%)
Query: 2 YIVNRLFFVRPWSLTIDDDIASMETLPIWVCFKNVPIYLWNSKGLAMIASRLGRPIMLDE 61
++ + L FV PWS D+ + T+P+WV KN+P L++ G++ IAS LG P+ +
Sbjct: 214 HVDDCLMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYK 273
Query: 62 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKFTGCGVFGHSM 121
P S ++ A + +E+ + P I+ +NVEYAW P K CG GH
Sbjct: 274 PRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHKA 333
Query: 122 GNC 124
C
Sbjct: 334 SRC 336
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 IVNRLFFVRPWSLTID---DDIASMETLPIWVCFKNVPIYLWNSKGLAMIASRLGRPIML 59
++ V+ WS D DDI T P+WV N+P ++ L IA LGRP+ +
Sbjct: 140 VLGNYLLVQDWSSRFDPLRDDIV---TTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKV 196
Query: 60 DEPTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKFTGCGVFGH 119
D T + FARVCIE+ + + P + I + V Y + CG++GH
Sbjct: 197 DMNTINFDKGRFARVCIEV--NLAKPLKGTVLINGDRYF---VAYEGLSKICSSCGIYGH 251
Query: 120 SMGNC 124
+ +C
Sbjct: 252 LVHSC 256
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%)
Query: 2 YIVNRLFFVRPWSLTIDDDIASMETLPIWVCFKNVPIYLWNSKGLAMIASRLGRPIMLDE 61
++ + L FV WS + ++ + +P W+ KN+P L++ KG+ IAS +G ++
Sbjct: 227 HVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSR 286
Query: 62 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLK 110
P +++ A++ +E+ D P+ ++ ++V Y+W P K
Sbjct: 287 PWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSK 335
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 24 METLPIWVCFKNVPIYLWNSKGLAMIASRLGRPIMLDEPTARRSRLAFARVCIEIPKDCS 83
++T W KNVP L++ +G+++IAS +G P+ ++ +R + R +++ +
Sbjct: 228 LQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEK--SRLGPVNIGRTKVKVVTNLG 285
Query: 84 MPKVISFTIPNAK--QIDINVEYAWKPLKFTGCGVFGHSMGNCTTTARPIARE---NKEA 138
P S + + + + V Y P K CG +GH + C ++P+ ++ K+
Sbjct: 286 TPLPDSIVVRDVQGNTARVAVTYPRPPPKCLNCGRYGHLLSRC---SKPLMKKLPFKKDL 342
Query: 139 ASASMKEPEMQKAPIVTGTRAQGGV 163
S S KE ++ + T AQ G+
Sbjct: 343 PSGS-KEVQILVISLPTSQEAQRGI 366