BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0500.1
(394 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 98 6e-22
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 82 2e-16
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 64 1e-10
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 59 2e-09
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 57 9e-09
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 97.8 bits (242), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 12 GSSVVCSFQN-ALRKAWRLKGAMKLTVFNTSFVM-KFDLEEDRLMVLEQGPMCIANRLFI 69
GS + S N LR+ W+ G M + F M +F+LEE+ + L GP + +
Sbjct: 87 GSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLL 146
Query: 70 IRPWKLHIEEEIEEVSIVPVWVTLRNLPFVMFNTKGIGLVANILGTPLILDTPTEQQTKM 129
++ W + +++ PVWV L N+P+ ++ + +A LG PL +D T K
Sbjct: 147 VQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKG 206
Query: 130 SYARVCVEMDIDHSRPKIVNLLIDDDRWVEVAVEYSWKPERCTTCGVFGHTFRRCPQGV 188
+ARVC+E+++ ++P +LI+ DR+ V Y + C++CG++GH CP+ V
Sbjct: 207 RFARVCIEVNL--AKPLKGTVLINGDRYF---VAYEGLSKICSSCGIYGHLVHSCPRNV 260
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 67 LFIIRPWKLHIEEEIEEVSIVPVWVTLRNLPFVMFNTKGIGLVANILGTPLILDTPTEQQ 126
L + PW ++ E+S +PVWVTL+N+P +++ GI +A+ LG P+ P
Sbjct: 219 LMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYKPRLDP 278
Query: 127 TKMSYARVCVEMDIDHSRPKIVNLLIDDDRWVEVAVEYSWKPERCTTCGVFGHTFRRC 184
+ MS A + VE+++ + P + + V VEY+W P +C CG GH RC
Sbjct: 279 SLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHKASRC 336
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%)
Query: 67 LFIIRPWKLHIEEEIEEVSIVPVWVTLRNLPFVMFNTKGIGLVANILGTPLILDTPTEQQ 126
L + W E+ E++++P W+TL+N+P +++ KGI +A+ +G ++ P
Sbjct: 232 LMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSRPWLDP 291
Query: 127 TKMSYARVCVEMDIDHSRPKIVNLLIDDDRWVEVAVEYSWKPERC 171
T+M A++ VE+ +D P+ V L + V V YSW P +C
Sbjct: 292 TQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKC 336
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 41 SFVMKFDLEEDRLMVLEQGPMCIANRLFIIRPWKLHIEEEIEEVSIVPVWVTLRNLPFVM 100
F F LEE VL +GP + + +++ W E +I +P WV +R +PF
Sbjct: 172 QFHFIFTLEESLETVLRRGPWAFNDWMILLQRW----EPQIPLFPFIPFWVQIRGIPFQF 227
Query: 101 FNTKGIGLVANILGTPLILDTPTEQQTKMSYARVCVEMDIDHSRPKIVNLLIDDDRWVEV 160
N + + LG L D E +M +ARV + DI H P V
Sbjct: 228 LNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITH--PLRFQRHFQFTAGVNT 285
Query: 161 AVEYSWKPER--CTTCGVFGHTFRRC 184
+ + ++ R C CG+ H F C
Sbjct: 286 LLRFRYERLRGFCEVCGMLTHDFGAC 311
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 80 EIEEVSIVPVWVTLRNLPFVMFNTKGIGLVANILGTPLILDTPTEQQTKMSYARVCVEMD 139
E +E+ W L+N+P +++ +GI ++A+ +G PL + + +V V +
Sbjct: 224 EPQELQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEKSRLGPVNIGRTKVKVVTN 283
Query: 140 IDHSRPKIVNLLIDDDRWVEVAVEYSWKPERCTTCGVFGHTFRRCPQGVRRNVPQRKTPI 199
+ P + + VAV Y P +C CG +GH RC + + + +P +K
Sbjct: 284 LGTPLPDSIVVRDVQGNTARVAVTYPRPPPKCLNCGRYGHLLSRCSKPLMKKLPFKK--- 340
Query: 200 SKDDIPGKGKD 210
D+P K+
Sbjct: 341 ---DLPSGSKE 348