BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0510.1
(1078 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 136 7e-33
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 81 2e-15
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 78 2e-14
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 65 3e-10
AT3G57587.1 | Ta11-like non-LTR retrotransposon | Chr3:21328263-... 60 5e-09
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 136 bits (343), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 142/316 (44%), Gaps = 41/316 (12%)
Query: 524 SHFQEFSECVQDAALMDCPYSGRKPFKFFNCWCDEPGFMELVEEEWSCKVK-GTPMFILI 582
S + S C+ L + P +K F++F+ P F+ + W ++ G+ MF L
Sbjct: 309 SGVSDHSPCI--IILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLG 366
Query: 583 TKLKKVKARLVQWKVAKFSNMAGQVASAKKVVEELQDQLHDQPQGVEIRRLERQAVASYT 642
LK K F N+ + A +E +Q QL P + R+E A +
Sbjct: 367 EHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSD-SLFRVEHVARKKWN 425
Query: 643 HLAGAEASMLRQKARVKWLNDDDANTKFFHSTIRERKARNSIFKLTNGEGVVLED----- 697
A A S RQK+R+KWL D DANT+FFH I +A+N I L + V +E+
Sbjct: 426 FFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVK 485
Query: 698 -------QHDIVQEFDLAGP--VTR-----------------------DEIMFALSTSGS 725
H + + D+ P V R EI A+
Sbjct: 486 EMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPR 545
Query: 726 NKAPGHDGFSSYFFKRCWAIVGNDFSKAISSFFKSSKLLGEVNATFVSLVPKVPNVNSMG 785
NKAPG D F++ FF W +V + A+ FF++ LL NAT ++L+PKV V+ +
Sbjct: 546 NKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLS 605
Query: 786 DFRPIACCNVIYKTIT 801
FRP++CC V+YK IT
Sbjct: 606 MFRPVSCCTVVYKIIT 621
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 49 KPMVSFVMADFEDERKEYESWLVGSFVGRRLSFPAVYNALVKAWRPKGELKVTLHGDSLF 108
+P+++ E ++ ++ +G ++ + L + W+P G + V F
Sbjct: 60 EPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFF 119
Query: 109 FIKLSVDEDRERALDHEPLFIMNHLFIVRPWSPFIEFEFQKLDSIPLWVCFREVPSLFWN 168
I+ ++E+ AL P ++ + +V+ WS + + + P+WV +P +++
Sbjct: 120 MIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYH 179
Query: 169 PKGIARIASALVKPIMLDHPTETKARMAYARVCIEVGRDCQYPAEIPLLIDGEKMNPVKV 228
+ IA L +P+ +D T + +ARVCIEV + P + +LI+G++ V
Sbjct: 180 RCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEV--NLAKPLKGTVLINGDRYF---V 234
Query: 229 EYQWRPPLCSGCNEFGHLLGKCPKS 253
Y+ +CS C +GHL+ CP++
Sbjct: 235 AYEGLSKICSSCGIYGHLVHSCPRN 259
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 133 LFIVRPWSPFIEFEFQKLDSIPLWVCFREVPSLFWNPKGIARIASALVKPIMLDHPTETK 192
L V PWS F+ ++ +IP+WV + +P+ ++ GI+ IAS L P+ P
Sbjct: 219 LMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYKPRLDP 278
Query: 193 ARMAYARVCIEVGRDCQYPAEIPLLIDGEKMNPVKVEYQWRPPLCSGCNEFGHLLGKCPK 252
+ M+ A + +EV +P I + ++ V VEY W P C C + GH +C K
Sbjct: 279 SLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHKASRCMK 338
Query: 253 SPRHHE 258
HE
Sbjct: 339 PHLAHE 344
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 120 RALDHEPLFIMNHLFIVRPWSPFIEFEFQKLDSIPLWVCFREVPSLFWNPKGIARIASAL 179
RAL H + + L V WSP FE ++ IP W+ + +P+ ++ KGI IAS +
Sbjct: 223 RALWH----VDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGI 278
Query: 180 VKPIMLDHPTETKARMAYARVCIEVGRDCQYPAEIPLLIDGEKMNPVKVEYQWRPPLC-- 237
+ ++ P +M A++ +EV D +P + L + + V V Y W P C
Sbjct: 279 GETMLTSRPWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKCLE 338
Query: 238 ----SGCN 241
S CN
Sbjct: 339 KTVVSACN 346
>AT3G57587.1 | Ta11-like non-LTR retrotransposon |
Chr3:21328263-21329357 FORWARD LENGTH=364 | 201606
Length = 364
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 83 AVYNALVKAWRPKGELKVTLHG---DSLFFIKLSVDE-DRERALDHEPLFIMNHLFIVRP 138
AV AL + W + V +HG D+ + L +E D + EP N +
Sbjct: 53 AVIAALPRYW----GMTVHVHGRILDATYVQFLFQNEVDLQSVQRREPWIFNNWFVATQR 108
Query: 139 WSPFIEFEFQKLDSIPLWVCFREVPSLFWNPKGIARIASALVKPIMLDHPTETKARMAYA 198
W P F + SI LWV R +P + + IA L + IMLDH T ++ Y
Sbjct: 109 WEPAPALNF--VTSIDLWVQIRGIPLPYVCEETALEIARDLGEVIMLDHHDATSTQITYI 166
Query: 199 RVCIEVGRDCQYPAEIPLLIDGEKMNPVKVEYQWRPPLCSGCNEFGHLLGKCPKSPRHH 257
RV + G + ++ D ++ ++ +Y+ +CS C F H CP PR H
Sbjct: 167 RVRVRFGITDRLRFFQRIIFDSGEVVTIRFQYERLRRICSSCFRFTHNRAYCPYRPRPH 225