BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0610.1
(241 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG01190.1 | ATP synthase subunit 1 | ChrM:302166-303689 REVERS... 219 1e-68
AT2G07698.1 | ATPase%2C F1 complex%2C alpha subunit protein | Ch... 220 9e-67
ATCG00120.1 | ATP synthase subunit alpha | ChrC:9938-11461 REVER... 125 7e-33
>ATMG01190.1 | ATP synthase subunit 1 | ChrM:302166-303689 REVERSE
LENGTH=507 | 201606
Length = 507
Score = 219 bits (558), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 108/129 (83%), Positives = 116/129 (89%)
Query: 83 RAAELATLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIA 142
RAAEL L ESRI NFY NFQVDEIGRVVSVGDGIA+VYGLNEIQAGEMV FA+GVKG+A
Sbjct: 6 RAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMA 65
Query: 143 LNLEKENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGVLMD 202
LNLE ENVGIVVFG DTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDA+GVPIDG+G L D
Sbjct: 66 LNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSD 125
Query: 203 HKRRLLAAK 211
H++R + K
Sbjct: 126 HEQRRVEVK 134
>AT2G07698.1 | ATPase%2C F1 complex%2C alpha subunit protein |
Chr2:3361474-3364028 FORWARD LENGTH=777 | 201606
Length = 777
Score = 220 bits (560), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 108/133 (81%), Positives = 119/133 (89%)
Query: 79 VDKLRAAELATLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGV 138
+++ RAAEL L ESRI NFY NFQVDEIGRVVSVGDGIA+VYGLNEIQAGEMV FA+GV
Sbjct: 272 LEERRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGV 331
Query: 139 KGIALNLEKENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 198
KG+ALNLE ENVGIVVFG DTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDA+GVPIDG+G
Sbjct: 332 KGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKG 391
Query: 199 VLMDHKRRLLAAK 211
L DH++R + K
Sbjct: 392 ALSDHEQRRVEVK 404
>ATCG00120.1 | ATP synthase subunit alpha | ChrC:9938-11461 REVERSE
LENGTH=507 | 201606
Length = 507
Score = 125 bits (313), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 84/129 (65%)
Query: 82 LRAAELATLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGI 141
+RA E++ ++ RI + + G V+ VGDGIAR+YGL+E+ AGE+VEF G GI
Sbjct: 4 IRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGI 63
Query: 142 ALNLEKENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGVLM 201
ALNLE NVG+V+ G I+EG VK TG I +P +A LGRV++AL PIDGRG +
Sbjct: 64 ALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKIS 123
Query: 202 DHKRRLLAA 210
+ RL+ +
Sbjct: 124 ASESRLIES 132