BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0680.1
(401 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 95 6e-21
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 86 6e-18
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 59 3e-09
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 53 3e-07
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 95.1 bits (235), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 33 ATKNKGSSWGSLFRPDDR------KYRAKLDYSPSPVSKEGEIPEINLNDFEDEIKECEN 86
ATK KGS+ G + +P+D + R L++ E E P I + + E+ E N
Sbjct: 22 ATKVKGSAGGGILKPEDVIDDEFVRERVGLEFP----DGEDEEPVITIGE---EVLEAMN 74
Query: 87 LL-----VGSFVGQRLPFSLVRRVLVSRWRPKREMFLTVYGESSYIIRLSLEEDRQRILE 141
L + +G ++P S++ R L W+P M + ++IR LEE+ L
Sbjct: 75 GLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALT 134
Query: 142 LEPMYIVNRLFFVRPWSLTID---DDIASMETLPIWVCFRNVPMYLWNSKGLAMIASRLG 198
P ++ V+ WS D DDI T P+WV N+P ++ L IA LG
Sbjct: 135 GGPWRVLGNYLLVQDWSSRFDPLRDDIV---TTPVWVRLSNIPYNYYHRCLLMEIARGLG 191
Query: 199 KPIMLDEPTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKCTGC 258
+P+ +D T + FARVCIE+ + + P + I + V Y C+ C
Sbjct: 192 RPLKVDMNTINFDKGRFARVCIEV--NLAKPLKGTVLINGDRYF---VAYEGLSKICSSC 246
Query: 259 GVFGHSVGNC 268
G++GH V +C
Sbjct: 247 GIYGHLVHSC 256
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 85.9 bits (211), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 146 YIVNRLFFVRPWSLTIDDDIASMETLPIWVCFRNVPMYLWNSKGLAMIASRLGKPIMLDE 205
++ + L FV PWS D+ + T+P+WV +N+P L++ G++ IAS LG P+ +
Sbjct: 214 HVDDCLMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATYK 273
Query: 206 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKCTGCGVFGHSV 265
P S ++ A + +E+ + P I+ +NVEYAW P KC CG GH
Sbjct: 274 PRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHKA 333
Query: 266 GNC 268
C
Sbjct: 334 SRC 336
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 146 YIVNRLFFVRPWSLTIDDDIASMETLPIWVCFRNVPMYLWNSKGLAMIASRLGKPIMLDE 205
++ + L FV WS + ++ + +P W+ +N+P L++ KG+ IAS +G+ ++
Sbjct: 227 HVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTSR 286
Query: 206 PTARRSRLAFARVCIEIPKDCSMPKVISFTIPNAKQIDINVEYAWKPLKC---------- 255
P +++ A++ +E+ D P+ ++ ++V Y+W P KC
Sbjct: 287 PWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKCLEKTVVSACN 346
Query: 256 TGCGVFGHSVGNCTTTARPNARENKEAA 283
G + +S+ N +T A A + AA
Sbjct: 347 NGTPLNENSIVNASTKALDTAIVSNGAA 374
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 168 METLPIWVCFRNVPMYLWNSKGLAMIASRLGKPIMLDEPTARRSRLAFARVCIEIPKDCS 227
++T W +NVP L++ +G+++IAS +G+P+ ++ +R + R +++ +
Sbjct: 228 LQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEK--SRLGPVNIGRTKVKVVTNLG 285
Query: 228 MPKVISFTIPNAK--QIDINVEYAWKPLKCTGCGVFGHSVGNCTTTARPNARENKEAASA 285
P S + + + + V Y P KC CG +GH + C+ K+ S
Sbjct: 286 TPLPDSIVVRDVQGNTARVAVTYPRPPPKCLNCGRYGHLLSRCSKPLMKKLPFKKDLPSG 345
Query: 286 SMKEPEMQKAPIVTGTRAQGGV 307
S KE ++ + T AQ G+
Sbjct: 346 S-KEVQILVISLPTSQEAQRGI 366