BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0690.1
(186 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV... 47 3e-06
>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
REVERSE LENGTH=777 | 201606
Length = 777
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 1 MSYSSVFILTEFEPKHDCLDVVLNPSDPKLSSKLVGNLTCKEIKKNPDRTTADVMEKFLD 60
+S + + + + P H C + + + S V ++ +++K P+ D++ +
Sbjct: 259 LSTTQLICIKKMNPTHTC-EGAGGINGLQTSRSWVASIIKEKLKVFPNYKPKDIVSDIKE 317
Query: 61 DYGINLGYYYSYHSRKFAMNRAFGEEGDSYAKLKWYVDALKRTNPNSRIDLQVDENSHRY 120
+YGI L Y+ ++ ++ A + G D Y +L + + + TNP S E+S +
Sbjct: 318 EYGIQLNYFQAWRGKEIAREQLQGSYKDGYKQLPLFCEKIMETNPGSLATFTTKEDSSFH 377
Query: 121 GAITSQISESFNSMIKKARVLPITAMLDAIRQK 153
S S + ++ R L LD+++ K
Sbjct: 378 RVFVS-FHASVHGFLEACRPL---VFLDSMQLK 406