BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0730.1
(1338 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 304 9e-91
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 304 9e-91
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 289 3e-82
AT3G24255.3 | RNA-directed DNA polymerase (reverse transcriptase... 263 7e-77
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 245 5e-69
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 304 bits (779), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 287/519 (55%), Gaps = 19/519 (3%)
Query: 635 IVTHLAFADDLLVFSKGDMGSVEALHDVLAQFLVCTGLRVNQGKSSLFAAGLSEGVVGQV 694
++THL FADDLLVF+ G S+E + + +F +GL+++ KS+++ AG+ + +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 695 ATCLGFGYGSLPVRYLGVPLISSRLKYYDCMPLLDKVRNKIKSWKTKFLSYAGRVVVIRT 754
F G+LPVRYLG+PL++ ++ D PL++K+R +I W + LS+AGR+ +I +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 755 ILQSMVLFWFSVFDLPKRVIKELDAMLSKFLWNGAGGENRKAAVGWSKVCFPVLEGGLGI 814
++ S+ FW S F LP IKE+D++ S FLW+G +KA V WS VC P EGGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 815 RNLNVLNIACCLRHMWDIFITKDTLWVQWVQANIIKKKEFWLME-ITSSASWVWRRLMQY 873
R+L N L+ +W + ++ +LWVQW++ +++K FW + T+ SW+W++++++
Sbjct: 187 RSLKEANKVSLLKLIWRM-LSSTSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 874 RVYGLRFAVHIIGNGSSTRLWKDNWHPLGILAQFFSDIFRYDSRVHAGAMVSSCILNGEW 933
R F H I NGS+T W DNW +G L D+ + + G + + + E
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWSKIGRLI----DVTGHRGCIDMGITLHASV--AEA 299
Query: 934 VVPWQLDEFLGDFTALLQEVPID------ADSDDLLIWKA-GDSGE--FSLKETYEAMRQ 984
VV + D +++V + +D + WK GD + F+ KET+ A R+
Sbjct: 300 VVNHRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATRE 359
Query: 985 IGVEVHWHRLVWFSHNIPRQSFIAWLALRGGLKTKCKLLFWGIEVDPTCFLCNQGSEDES 1044
++V+W++ VWFSH P+ S +AW+A++ L T ++L W D +C LC+ E
Sbjct: 360 PKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRD 419
Query: 1045 HLFFHCNYSKFIWTELLHNLGLVRINRSDWENEVVWCSTMFKGRDVLALIGKLAFCCFIY 1104
HLFF C YS +W+ L L L + + WE + + G +V + + F ++
Sbjct: 420 HLFFTCPYSAEVWSTLTRKL-LSQHFTNRWEAILKLLTNKSLGHEV-PFLTRYTFQLTLH 477
Query: 1105 HIWWERNRRFHDGVSLSKELLLQQIITDIRLKIISIKCQ 1143
+W ERN R H V + +++ + +R +I SI+ Q
Sbjct: 478 SLWKERNGRRHGEVPQAAAQMVRFLDKQVRNRISSIQSQ 516
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 304 bits (779), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 287/519 (55%), Gaps = 19/519 (3%)
Query: 635 IVTHLAFADDLLVFSKGDMGSVEALHDVLAQFLVCTGLRVNQGKSSLFAAGLSEGVVGQV 694
++THL FADDLLVF+ G S+E + + +F +GL+++ KS+++ AG+ + +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 695 ATCLGFGYGSLPVRYLGVPLISSRLKYYDCMPLLDKVRNKIKSWKTKFLSYAGRVVVIRT 754
F G+LPVRYLG+PL++ ++ D PL++K+R +I W + LS+AGR+ +I +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 755 ILQSMVLFWFSVFDLPKRVIKELDAMLSKFLWNGAGGENRKAAVGWSKVCFPVLEGGLGI 814
++ S+ FW S F LP IKE+D++ S FLW+G +KA V WS VC P EGGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 815 RNLNVLNIACCLRHMWDIFITKDTLWVQWVQANIIKKKEFWLME-ITSSASWVWRRLMQY 873
R+L N L+ +W + ++ +LWVQW++ +++K FW + T+ SW+W++++++
Sbjct: 187 RSLKEANKVSLLKLIWRM-LSSTSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 874 RVYGLRFAVHIIGNGSSTRLWKDNWHPLGILAQFFSDIFRYDSRVHAGAMVSSCILNGEW 933
R F H I NGS+T W DNW +G L D+ + + G + + + E
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWSKIGRLI----DVTGHRGCIDMGITLHASV--AEA 299
Query: 934 VVPWQLDEFLGDFTALLQEVPID------ADSDDLLIWKA-GDSGE--FSLKETYEAMRQ 984
VV + D +++V + +D + WK GD + F+ KET+ A R+
Sbjct: 300 VVNHRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATRE 359
Query: 985 IGVEVHWHRLVWFSHNIPRQSFIAWLALRGGLKTKCKLLFWGIEVDPTCFLCNQGSEDES 1044
++V+W++ VWFSH P+ S +AW+A++ L T ++L W D +C LC+ E
Sbjct: 360 PKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRD 419
Query: 1045 HLFFHCNYSKFIWTELLHNLGLVRINRSDWENEVVWCSTMFKGRDVLALIGKLAFCCFIY 1104
HLFF C YS +W+ L L L + + WE + + G +V + + F ++
Sbjct: 420 HLFFTCPYSAEVWSTLTRKL-LSQHFTNRWEAILKLLTNKSLGHEV-PFLTRYTFQLTLH 477
Query: 1105 HIWWERNRRFHDGVSLSKELLLQQIITDIRLKIISIKCQ 1143
+W ERN R H V + +++ + +R +I SI+ Q
Sbjct: 478 SLWKERNGRRHGEVPQAAAQMVRFLDKQVRNRISSIQSQ 516
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 289 bits (739), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 246/429 (57%), Gaps = 17/429 (3%)
Query: 635 IVTHLAFADDLLVFSKGDMGSVEALHDVLAQFLVCTGLRVNQGKSSLFAAGLSEGVVGQV 694
++THL FADDLLVF+ G S+E + + +F +GL+++ KS+++ AG+ + +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 695 ATCLGFGYGSLPVRYLGVPLISSRLKYYDCMPLLDKVRNKIKSWKTKFLSYAGRVVVIRT 754
F G+LPVRYLG+PL++ ++ D PL++K+R +I W + LS+AGR+ +I +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 755 ILQSMVLFWFSVFDLPKRVIKELDAMLSKFLWNGAGGENRKAAVGWSKVCFPVLEGGLGI 814
++ S+ FW S F LP IKE+D++ S FLW+G +KA V WS VC P EGGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 815 RNLNVLNIACCLRHMWDIFITKDTLWVQWVQANIIKKKEFWLME-ITSSASWVWRRLMQY 873
R+L N L+ +W + ++ +LWVQW++ +++K FW + T+ SW+W++++++
Sbjct: 187 RSLKEANKVSLLKLIWRM-LSSTSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 874 RVYGLRFAVHIIGNGSSTRLWKDNWHPLGILAQFFSDIFRYDSRVHAGAMVSSCILNGEW 933
R F H I NGS+T W DNW +G L D+ + + G + + + E
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWSKIGRLI----DVTGHRGCIDMGITLHASV--AEA 299
Query: 934 VVPWQLDEFLGDFTALLQEVPID------ADSDDLLIWKA-GDSGE--FSLKETYEAMRQ 984
VV + D +++V + +D + WK GD + F+ KET+ A R+
Sbjct: 300 VVNHRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATRE 359
Query: 985 IGVEVHWHRLVWFSHNIPRQSFIAWLALRGGLKTKCKLLFWGIEVDPTCFLCNQGSEDES 1044
++V+W++ VWFSH P+ S +AW+A++ L T ++L W D +C LC+ E
Sbjct: 360 PKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRD 419
Query: 1045 HLFFHCNYS 1053
HLFF C YS
Sbjct: 420 HLFFTCPYS 428
>AT3G24255.3 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789471-8790907 FORWARD LENGTH=478 | 201606
Length = 478
Score = 263 bits (673), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 254/470 (54%), Gaps = 19/470 (4%)
Query: 684 AGLSEGVVGQVATCLGFGYGSLPVRYLGVPLISSRLKYYDCMPLLDKVRNKIKSWKTKFL 743
AG+ + + F G+LPVRYLG+PL++ ++ D PL++K+R +I W + L
Sbjct: 2 AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61
Query: 744 SYAGRVVVIRTILQSMVLFWFSVFDLPKRVIKELDAMLSKFLWNGAGGENRKAAVGWSKV 803
S+AGR+ +I +++ S+ FW S F LP IKE+D++ S FLW+G +KA V WS V
Sbjct: 62 SFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDV 121
Query: 804 CFPVLEGGLGIRNLNVLNIACCLRHMWDIFITKDTLWVQWVQANIIKKKEFWLME-ITSS 862
C P EGGLGIR+L N L+ +W + ++ +LWVQW++ +++K FW + T+
Sbjct: 122 CTPKDEGGLGIRSLKEANKVSLLKLIWRM-LSSTSLWVQWLRLYLLRKGSFWSISGNTTL 180
Query: 863 ASWVWRRLMQYRVYGLRFAVHIIGNGSSTRLWKDNWHPLGILAQFFSDIFRYDSRVHAGA 922
SW+W++++++R F H I NGS+T W DNW +G L D+ + + G
Sbjct: 181 GSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLI----DVTGHRGCIDMGI 236
Query: 923 MVSSCILNGEWVVPWQLDEFLGDFTALLQEVPID------ADSDDLLIWKA-GDSGE--F 973
+ + + E VV + D +++V + +D + WK GD + F
Sbjct: 237 TLHASV--AEAVVNHRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCF 294
Query: 974 SLKETYEAMRQIGVEVHWHRLVWFSHNIPRQSFIAWLALRGGLKTKCKLLFWGIEVDPTC 1033
+ KET+ A R+ ++V+W++ VWFSH P+ S +AW+A++ L T ++L W D +C
Sbjct: 295 NTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSC 354
Query: 1034 FLCNQGSEDESHLFFHCNYSKFIWTELLHNLGLVRINRSDWENEVVWCSTMFKGRDVLAL 1093
LC+ E HLFF C YS +W+ L L L + + WE + + G +V
Sbjct: 355 VLCHHLVETRDHLFFTCPYSAEVWSTLTRKL-LSQHFTNRWEAILKLLTNKSLGHEV-PF 412
Query: 1094 IGKLAFCCFIYHIWWERNRRFHDGVSLSKELLLQQIITDIRLKIISIKCQ 1143
+ + F ++ +W ERN R H V + +++ + +R +I SI+ Q
Sbjct: 413 LTRYTFQLTLHSLWKERNGRRHGEVPQAAAQMVRFLDKQVRNRISSIQSQ 462
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 245 bits (625), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 247/484 (51%), Gaps = 49/484 (10%)
Query: 1 MPTWHWENNYDCDNLGRVWLLWDPSQLTVTMCAKTDQVVTAQVLLKDGRAFLLSCVYARN 60
+P+W + NY C LGR+W++WDPS ++V + KTDQ++ +L+ D
Sbjct: 184 LPSWRLDTNYCCSELGRIWIVWDPS-VSVLVFKKTDQLM---ILVGD------------- 226
Query: 61 VAVDRRELWSELRRVADNYDGPWLVMGDFNCVLQVEEKVGGVGIQHGGLKDFRDCVDDTN 120
+ ++ +D+Y VLQ I GL++F++C+ D++
Sbjct: 227 --------FDQIAATSDHY-----------SVLQ-------TSIPMRGLEEFQNCLRDSD 260
Query: 121 LFDCPFTGSVFTWTNSQGGDKCISEKLDRALVNIEWSQEFTNAKAEFLPPGVSDHSPCVV 180
L D P G +TW+N Q D I KLDRA+ N +W F +A A F GVSDHSPC++
Sbjct: 261 LVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCII 319
Query: 181 SLFGGERTGPRPFKFFNCWTEEADFLEVVKKAWTIEV-TGTPMFRLVCKLKSVRAALNGW 239
L + + F++F+ + FL + AW ++ G+ MF L LK+ +
Sbjct: 320 ILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLL 379
Query: 240 KRGRFSEISGQVSQARKRMEECQTQLQVNPLSAEFRKEERIAVAEFSKKARMEESMLRQK 299
R F I + +A +E Q+QL NP + FR E +A +++ A ES RQK
Sbjct: 380 NRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEH-VARKKWNFFAAALESFYRQK 438
Query: 300 SRIQNIDLGDSNSKFFHASLKERRSRNNIAFLYNSRNEKVVQSSLVAEECVHYFQQMFGI 359
SRI+ + GD+N++FFH + +++N I FL + +V + V E V Y+ + G
Sbjct: 439 SRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLG- 497
Query: 360 SEFPRELPDLLNGIEFGSTLVGQE--ADMLIGKVTRDEVVQALASIGFEKAPGPDGFTSY 417
S+ PD + I+ + A L + E+ A+ ++ KAPGPD FT+
Sbjct: 498 SDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAE 557
Query: 418 FFRFCWEIVGDDFTEAVLRFFKSGKLLKEVNSTLVTLVPKSTNASRVSEFRPISCCNVVY 477
FF W +V D AV FF++G LLK N+T +TL+PK T ++S FRP+SCC VVY
Sbjct: 558 FFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVY 617
Query: 478 KCIT 481
K IT
Sbjct: 618 KIIT 621