BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0740.1
(456 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 98 1e-21
AT2G07760.1 | Zinc knuckle (CCHC-type) family protein | Chr2:358... 77 6e-15
AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVE... 55 6e-08
AT2G13450.1 | Ta11-like non-LTR retrotransposon | Chr2:5598739-5... 55 8e-08
AT5G32613.1 | Zinc knuckle (CCHC-type) family protein | Chr5:122... 52 5e-07
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 16/237 (6%)
Query: 47 RSKLEFSPSMLTEDGKPEISLEEFEEEIKECEN-----LLVGSFVGQRLPFPVVRRILFA 101
R LEF ED +P I++ E E+ E N ++ +G ++P V+ R L
Sbjct: 48 RVGLEFPDG---EDEEPVITIGE---EVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRE 101
Query: 102 RWKPKGDMILTVHGDSAYLIRFSLEEDRQKVLDMEPFFISNRLFIVRPWELFIEEDIASM 161
WKP G M + ++IRF LEE+ L P+ + +V+ W + +
Sbjct: 102 LWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDI 161
Query: 162 ETLPVWVCFRRVPMFLWNPKGLAKIASQIGRPIMLDEQTEKRTRTGYARVCIEISKDCAM 221
T PVWV +P ++ L +IA +GRP+ +D T + +ARVCIE+ + A
Sbjct: 162 VTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEV--NLAK 219
Query: 222 PEVLSFMVKGEREFVVDVEYSWKPLKCTNCGSFGHHRGRCREHVRRNVQEGPAAGTD 278
P + ++ G+R FV Y C++CG +GH C +V V G TD
Sbjct: 220 PLKGTVLINGDRYFVA---YEGLSKICSSCGIYGHLVHSCPRNVVVKVSAGAETVTD 273
>AT2G07760.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:3584420-3586278 REVERSE LENGTH=530 | 201606
Length = 530
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 138 FFISNRLFIVRPWELFIEEDIASMETLPVWVCFRRVPMFLWNPKGLAKIASQIGRPIMLD 197
+ + + L V PW D+ + T+PVWV + +P L++ G++ IAS +G P+
Sbjct: 213 WHVDDCLMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLGAPMATY 272
Query: 198 EQTEKRTRTGYARVCIEISKDCAMPEVLSFMVKGEREFVVDVEYSWKPLKCTNCGSFGHH 257
+ + A + +E+ A P ++ + K +V+VEY+W P KC CG GH
Sbjct: 273 KPRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKCGQLGHK 332
Query: 258 RGRC 261
RC
Sbjct: 333 ASRC 336
>AT5G28823.1 | hypothetical protein | Chr5:10837849-10839826 REVERSE
LENGTH=568 | 201606
Length = 568
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 138 FFISNRLFIVRPWELFIEEDIASMETLPVWVCFRRVPMFLWNPKGLAKIASQIGRPIMLD 197
+ + + L V W ++ + +P W+ + +P L++ KG+ IAS IG ++
Sbjct: 226 WHVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTS 285
Query: 198 EQTEKRTRTGYARVCIEISKDCAMPEVLSFMVKGEREFVVDVEYSWKPLKC 248
T+ G A++ +E+ D P+ ++ + +VDV YSW P KC
Sbjct: 286 RPWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKC 336
>AT2G13450.1 | Ta11-like non-LTR retrotransposon |
Chr2:5598739-5599923 REVERSE LENGTH=394 | 201606
Length = 394
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 13/192 (6%)
Query: 113 VHG----DSAYLIRFSLEEDRQKVLDMEPFFISNRLFIVRPWELFIEEDIASMETLPVWV 168
VHG D+ F E D VL EP+ +N + WE+ + + + ++ +WV
Sbjct: 68 VHGRVLNDTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQRWEVNLTFHL--LTSIELWV 125
Query: 169 CFRRVPMFLWNPKGLAKIASQIGRPIMLDEQTEKRTRTGYARVCIEISKDCAMPEVLSFM 228
R +P+ + +IA ++G I LD T+ Y RV I + L +
Sbjct: 126 QMRGIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIRVRIRFGITDRLRFFLRII 185
Query: 229 VKGEREFVVDVEYSWKPLKCTNCGSFGHHRGRCREHVRRNVQEGPAAGTDATADTRMEQG 288
++ +Y C++C HHR C + R + E T+ TA + +
Sbjct: 186 FDSGETALISFQYERLRRICSSCFRMTHHRNSC---LYRQI-ESLHRVTNTTAQRNVRE- 240
Query: 289 SANVFARAQGLK 300
VF R + L+
Sbjct: 241 --EVFMRDENLR 250
>AT5G32613.1 | Zinc knuckle (CCHC-type) family protein |
Chr5:12263255-12265041 FORWARD LENGTH=457 | 201606
Length = 457
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 161 METLPVWVCFRRVPMFLWNPKGLAKIASQIGRPIMLDEQTEKRTRTGYARVCIEISKDCA 220
++T W + VP L++ +G++ IAS IG P+ ++ G +V + +
Sbjct: 228 LQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEKSRLGPVNIGRTKVKVVTNLGTP 287
Query: 221 MPEVLSFM-VKGEREFVVDVEYSWKPLKCTNCGSFGHHRGRCREHVRRNV 269
+P+ + V+G V V Y P KC NCG +GH RC + + + +
Sbjct: 288 LPDSIVVRDVQGNTARVA-VTYPRPPPKCLNCGRYGHLLSRCSKPLMKKL 336