BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0870.1
(683 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 162 2e-41
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 159 2e-41
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 159 2e-41
AT3G24255.3 | RNA-directed DNA polymerase (reverse transcriptase... 121 7e-29
AT3G24255.1 | RNA-directed DNA polymerase (reverse transcriptase... 119 1e-27
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 162 bits (409), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%)
Query: 484 MITHLRFADDLMVFMQGDLGSARALSHVLDLFAECTGLKVNRAKSSMFSAGLTDERIHGL 543
+ITHL FADDL+VF G S + + FA+ +GL+++ KS+++ AG+ D +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 544 RDCLGFVCASLLVRYLGVPLISSRLSYNDCQPLIDKVLSRIQSWKMRFLSYAGRLTLIRA 603
F +L VRYLG+PL++ +++ +D PL++K+ RI W R LS+AGRL LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 604 VLNGMVMFWFSVFVLPKRVINELNRIFMRFLWDGPDMSAKGASVSWTTICHSFKEGGINL 663
V++ + FW S F LP I E++ I FLW GP+++ K A V+W+ +C EGG+ +
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 664 RDLATLNIACTLRHIWELF 682
R L N L+ IW +
Sbjct: 187 RSLKEANKVSLLKLIWRML 205
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 159 bits (401), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%)
Query: 484 MITHLRFADDLMVFMQGDLGSARALSHVLDLFAECTGLKVNRAKSSMFSAGLTDERIHGL 543
+ITHL FADDL+VF G S + + FA+ +GL+++ KS+++ AG+ D +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 544 RDCLGFVCASLLVRYLGVPLISSRLSYNDCQPLIDKVLSRIQSWKMRFLSYAGRLTLIRA 603
F +L VRYLG+PL++ +++ +D PL++K+ RI W R LS+AGRL LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 604 VLNGMVMFWFSVFVLPKRVINELNRIFMRFLWDGPDMSAKGASVSWTTICHSFKEGGINL 663
V++ + FW S F LP I E++ I FLW GP+++ K A V+W+ +C EGG+ +
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 664 RDLATLNIACTLRHIWELF 682
R L N L+ IW +
Sbjct: 187 RSLKEANKVSLLKLIWRML 205
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 159 bits (401), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%)
Query: 484 MITHLRFADDLMVFMQGDLGSARALSHVLDLFAECTGLKVNRAKSSMFSAGLTDERIHGL 543
+ITHL FADDL+VF G S + + FA+ +GL+++ KS+++ AG+ D +
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 544 RDCLGFVCASLLVRYLGVPLISSRLSYNDCQPLIDKVLSRIQSWKMRFLSYAGRLTLIRA 603
F +L VRYLG+PL++ +++ +D PL++K+ RI W R LS+AGRL LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 604 VLNGMVMFWFSVFVLPKRVINELNRIFMRFLWDGPDMSAKGASVSWTTICHSFKEGGINL 663
V++ + FW S F LP I E++ I FLW GP+++ K A V+W+ +C EGG+ +
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 664 RDLATLNIACTLRHIWELF 682
R L N L+ IW +
Sbjct: 187 RSLKEANKVSLLKLIWRML 205
>AT3G24255.3 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789471-8790907 FORWARD LENGTH=478 | 201606
Length = 478
Score = 121 bits (303), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%)
Query: 533 AGLTDERIHGLRDCLGFVCASLLVRYLGVPLISSRLSYNDCQPLIDKVLSRIQSWKMRFL 592
AG+ D + F +L VRYLG+PL++ +++ +D PL++K+ RI W R L
Sbjct: 2 AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61
Query: 593 SYAGRLTLIRAVLNGMVMFWFSVFVLPKRVINELNRIFMRFLWDGPDMSAKGASVSWTTI 652
S+AGRL LI +V++ + FW S F LP I E++ I FLW GP+++ K A V+W+ +
Sbjct: 62 SFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDV 121
Query: 653 CHSFKEGGINLRDLATLNIACTLRHIWELF 682
C EGG+ +R L N L+ IW +
Sbjct: 122 CTPKDEGGLGIRSLKEANKVSLLKLIWRML 151
>AT3G24255.1 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789471-8793208 FORWARD LENGTH=746 | 201606
Length = 746
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%)
Query: 533 AGLTDERIHGLRDCLGFVCASLLVRYLGVPLISSRLSYNDCQPLIDKVLSRIQSWKMRFL 592
AG+ D + F +L VRYLG+PL++ +++ +D PL++K+ RI W R L
Sbjct: 2 AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61
Query: 593 SYAGRLTLIRAVLNGMVMFWFSVFVLPKRVINELNRIFMRFLWDGPDMSAKGASVSWTTI 652
S+AGRL LI +V++ + FW S F LP I E++ I FLW GP+++ K A V+W+ +
Sbjct: 62 SFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDV 121
Query: 653 CHSFKEGGINLRDLATLN 670
C EGG+ +R L N
Sbjct: 122 CTPKDEGGLGIRSLKEAN 139