BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0900.1
(421 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 123 3e-30
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 123 bits (308), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Query: 154 LRRQERVANENYSNVVRAETTMLRQRAKVDWLTLDDSNTAYFHNSIKERKSRNAITRLTR 213
L R E VA + ++ A + RQ++++ WL D+NT +FH I +++N I L
Sbjct: 413 LFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRM 472
Query: 214 EDGSVVEDPVEIANMCVDFYRDLFGREDEDNEALDHMSNVEFSRPL--TEAEGALLIMRV 271
+D VE+ ++ M V +Y L G D D D + ++ P + + L
Sbjct: 473 DDDVRVENVTQVKEMIVAYYTHLLG-SDSDILTPDSVQRIKDIHPFRCNDTLASRLSALP 531
Query: 272 TRDEIYTALQTIGSDRSPGPDGFSSHFLKACWSIMGDDFVETIQNFFSSGKLLKEVNSTF 331
+ EI A+ + +++PGPD F++ F W ++ D + ++ FF +G LLK N+T
Sbjct: 532 SDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATA 591
Query: 332 VTLIPKIDNASSVSDFRPISYCNVLYKCIT 361
+TLIPK+ +S FRP+S C V+YK IT
Sbjct: 592 ITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621