BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0050.1
(281 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 197 4e-57
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 197 4e-57
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 161 1e-48
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 87 2e-21
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 197 bits (501), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 1 LGIEVTSNSLNVLLLTQRKYALELLQKADLLDSNPSITPVSGGNRLSKYDGEPLSDPTFY 60
LG+E+ ++ + + QRKYAL+LL + LL PS P+ S + G D Y
Sbjct: 320 LGLEIARSAAGINI-CQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 61 RILVGGLQYLTMTRPDISFGVNYAAQFMQNPSSLHLQWVKKLLRYVNGTIGYGISITKEN 120
R L+G L YL +TR DISF VN +QF + P H Q V K+L Y+ GT+G G+ + +
Sbjct: 379 RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438
Query: 121 LTKLVGYSDSDWVGCPDTRRSTTGYCVVLGNALVSLCSKKQPTFAKSSTEAEYKALSIAA 180
+L +SD+ + C DTRRST GYC+ LG +L+S SKKQ +KSS EAEY+ALS A
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498
Query: 181 TEMQWITNVLTELKICIAKPFVIYYDNLGVKNIAANPICHARTNHIEVDYHFIRD 235
EM W+ EL++ ++KP +++ DN +IA N + H RT HIE D H +R+
Sbjct: 499 DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 197 bits (501), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 1 LGIEVTSNSLNVLLLTQRKYALELLQKADLLDSNPSITPVSGGNRLSKYDGEPLSDPTFY 60
LG+E+ ++ + + QRKYAL+LL + LL PS P+ S + G D Y
Sbjct: 320 LGLEIARSAAGINI-CQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 61 RILVGGLQYLTMTRPDISFGVNYAAQFMQNPSSLHLQWVKKLLRYVNGTIGYGISITKEN 120
R L+G L YL +TR DISF VN +QF + P H Q V K+L Y+ GT+G G+ + +
Sbjct: 379 RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438
Query: 121 LTKLVGYSDSDWVGCPDTRRSTTGYCVVLGNALVSLCSKKQPTFAKSSTEAEYKALSIAA 180
+L +SD+ + C DTRRST GYC+ LG +L+S SKKQ +KSS EAEY+ALS A
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498
Query: 181 TEMQWITNVLTELKICIAKPFVIYYDNLGVKNIAANPICHARTNHIEVDYHFIRD 235
EM W+ EL++ ++KP +++ DN +IA N + H RT HIE D H +R+
Sbjct: 499 DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 161 bits (408), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 10/189 (5%)
Query: 1 LGIEVTSNSLNVLLLTQRKYALELLQKADLLDSNPSITPV----SGGNRLSKYDGEPLSD 56
LGI++ ++ + L L+Q KYA ++L A +LD P TP+ + +KY D
Sbjct: 43 LGIQIKTHP-SGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-----PD 96
Query: 57 PTFYRILVGGLQYLTMTRPDISFGVNYAAQFMQNPSSLHLQWVKKLLRYVNGTIGYGISI 116
P+ +R +VG LQYLT+TRPDIS+ VN Q M P+ +K++LRYV GTI +G+ I
Sbjct: 97 PSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYI 156
Query: 117 TKENLTKLVGYSDSDWVGCPDTRRSTTGYCVVLGNALVSLCSKKQPTFAKSSTEAEYKAL 176
K + + + DSDW GC TRRSTTG+C LG ++S +K+QPT ++SSTE EY+AL
Sbjct: 157 HKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216
Query: 177 SIAATEMQW 185
++ A E+ W
Sbjct: 217 ALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 87.0 bits (214), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 69 YLTMTRPDISFGVNYAAQFMQNPSSLHLQWVKKLLRYVNGTIGYGISITKENLTKLVGYS 128
YLT+TRPD++F VN +QF + +Q V K+L YV GT+G G+ + + +L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 129 DSDWVGCPDTRRSTTGYC 146
DSDW CPDTRRS TG+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79