BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0070.1
(382 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 4e-61
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 4e-61
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 74 8e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (541), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 196/385 (50%), Gaps = 57/385 (14%)
Query: 2 LKSIRIILAIAAHYDYEIWQMDVKTAFLNGHLEEDVYMTQPEGFV----DSINAGKVCKL 57
L S+++ILAI+A Y++ + Q+D+ AFLNG L+E++YM P G+ DS+ VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 KKSIYGLKQASRSWNLRFDEKIKEFGFLKNAEESCVYKKVSGSDLVFLVLYVDDILIIGN 117
KKSIYGLKQASR W L+F + FGF+++ + + K++ + + +++YVDDI+I N
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292
Query: 118 NIPMLESVKDWLRKCFSMKDLGEAEYILGIKLYRDRSRRMIGLSQETYIDKILQRFEMTN 177
N ++ +K L+ CF ++DLG +Y LG+++ RS I + Q Y +L +
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLG 350
Query: 178 SKRGFLPM---------SHGQ--------------------------------------- 189
K +PM S G
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 190 -AHWHAAKNILKYLKRTKDHFLVYGGEDTLKVVGHVDASFQTDRDDFKSQSGFVYCLNGG 248
AH A IL Y+K T L Y + +++ DASFQ+ +D +S +G+ L
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 249 VVCWKSSKQRTVADSTTEAEYLAASEAAKEGVWIKKFLIELGVVPGMEEGVTLYCDNNGA 308
++ WKS KQ+ V+ S+ EAEY A S A E +W+ +F EL + + + L+CDN A
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAA 528
Query: 309 IAQAKEPRAHQKSKHIQRKYHLIRE 333
I A H+++KHI+ H +RE
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (541), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 196/385 (50%), Gaps = 57/385 (14%)
Query: 2 LKSIRIILAIAAHYDYEIWQMDVKTAFLNGHLEEDVYMTQPEGFV----DSINAGKVCKL 57
L S+++ILAI+A Y++ + Q+D+ AFLNG L+E++YM P G+ DS+ VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 KKSIYGLKQASRSWNLRFDEKIKEFGFLKNAEESCVYKKVSGSDLVFLVLYVDDILIIGN 117
KKSIYGLKQASR W L+F + FGF+++ + + K++ + + +++YVDDI+I N
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292
Query: 118 NIPMLESVKDWLRKCFSMKDLGEAEYILGIKLYRDRSRRMIGLSQETYIDKILQRFEMTN 177
N ++ +K L+ CF ++DLG +Y LG+++ RS I + Q Y +L +
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLG 350
Query: 178 SKRGFLPM---------SHGQ--------------------------------------- 189
K +PM S G
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 190 -AHWHAAKNILKYLKRTKDHFLVYGGEDTLKVVGHVDASFQTDRDDFKSQSGFVYCLNGG 248
AH A IL Y+K T L Y + +++ DASFQ+ +D +S +G+ L
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 249 VVCWKSSKQRTVADSTTEAEYLAASEAAKEGVWIKKFLIELGVVPGMEEGVTLYCDNNGA 308
++ WKS KQ+ V+ S+ EAEY A S A E +W+ +F EL + + + L+CDN A
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAA 528
Query: 309 IAQAKEPRAHQKSKHIQRKYHLIRE 333
I A H+++KHI+ H +RE
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 73.9 bits (180), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 50/227 (22%)
Query: 103 VFLVLYVDDILIIGNNIPMLESVKDWLRKCFSMKDLGEAEYILGIKLYRDRSRRMIGLSQ 162
++L+LYVDDIL+ G++ +L + L FSMKDLG Y LGI++ S + LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 163 ETYIDKILQRFEMTNSKRGFLPMS------------------------------------ 186
Y ++IL M + K P+
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 187 ------------HGQAHWHAAKNILKYLKRTKDHFLVYGGEDTLKVVGHVDASFQTDRDD 234
A + K +L+Y+K T H L L V D+ +
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 178
Query: 235 FKSQSGFVYCLNGGVVCWKSSKQRTVADSTTEAEYLAASEAAKEGVW 281
+S +GF L ++ W + +Q TV+ S+TE EY A + A E W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225