BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g0100.1
         (509 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947...    54   1e-07
AT1G34070.1 | Copia-like polyprotein/retrotransposon | Chr1:1240...    52   4e-07

>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
           Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
          Length = 369

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%)

Query: 18  SAREIWKFLEMMYIEEYEAKIASLKEQLQNLKRGDLTVSCYLRKIKNISDSLTAVSNKVP 77
           +AR++W  LE ++ +  EA+    + +L+     DL+V  Y +K+K++SD LT V + + 
Sbjct: 96  TARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPIS 155

Query: 78  ESELCRIALKGLGKEYKQFVIATHQREPKLSFPELRTRIIHHE 120
           +  L    L GL ++Y   +     + P  SF E R+ ++  E
Sbjct: 156 DRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEE 198


>AT1G34070.1 | Copia-like polyprotein/retrotransposon |
           Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606
          Length = 308

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%)

Query: 18  SAREIWKFLEMMYIEEYEAKIASLKEQLQNLKRGDLTVSCYLRKIKNISDSLTAVSNKVP 77
           ++R+IW  ++  +    +A+   L  +L+    GD+ V+ Y RK+K ++DSL  V   V 
Sbjct: 94  TSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVT 153

Query: 78  ESELCRIALKGLGKEYKQFVIATHQREPKLSFPELRTRIIHHEQCL 123
           +  L    L GL  ++   +     R+P  SF +  T +   E  L
Sbjct: 154 DRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDRL 199

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