BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0120.1
(794 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 408 e-128
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 408 e-128
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 218 2e-65
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 122 1e-31
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 87 5e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 408 bits (1048), Expect = e-128, Method: Compositional matrix adjust.
Identities = 203/464 (43%), Positives = 288/464 (62%), Gaps = 4/464 (0%)
Query: 334 SYIAAISSIPEPKTYKVASQDKNWVQAMQSEYEALVQNKTWSLTPRLPSMNVLGCKWVFK 393
S++ I+ EP TY A + W AM E A+ TW + P+ +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 394 VKYNSDGTLERYKARLVAQGYNQQEGIDYQETFSPVVKIQTVRVTLTLTMTHKWFIQQLD 453
+KYNSDGT+ERYKARLVA+GY QQEGID+ ETFSPV K+ +V++ L ++ + + + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 454 VSNAFLHGDLSEVVYMKQPAGFEDPQF----PTHVCQLHKSLYGLKQAPRAWFTRIASYL 509
+SNAFL+GDL E +YMK P G+ Q P VC L KS+YGLKQA R WF + + L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 510 HQWGFKRSSSDTSMFVFYLDGQILIFLLYVDDIILTGSSEFLMKKLVTDLGHEFAMKQLG 569
+GF +S SD + F+ L L+YVDDII+ +++ + +L + L F ++ LG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 570 TLHYFLGIEVQSNSSYLELTQTKYISELLHKSELQDSKPSLIPVSHGKRASKFDGEPIEN 629
L YFLG+E+ +++ + + Q KY +LL ++ L KPS +P+ S G +
Sbjct: 315 PLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVD 374
Query: 630 PLFYRSMVGGLQYATMTRPDIAFAVNYLAQFMQEPSTTHLILLKKVLRYLKGTIGDGIRV 689
YR ++G L Y +TR DI+FAVN L+QF + P H + K+L Y+KGT+G G+
Sbjct: 375 AKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY 434
Query: 690 VPGNIASLSGFSDSDWGSCPDSRRSTSGYCVFLGSTLICWSPKKQLVVSRSSTEAEYRAL 749
L FSD+ + SC D+RRST+GYC+FLG++LI W KKQ VVS+SS EAEYRAL
Sbjct: 435 SSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 750 SLAISEMLWVSYLLKELHVEVQMPMTIFCDNMGAKYLASNHVLH 793
S A EM+W++ +EL + + P +FCDN A ++A+N V H
Sbjct: 495 SFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 408 bits (1048), Expect = e-128, Method: Compositional matrix adjust.
Identities = 203/464 (43%), Positives = 288/464 (62%), Gaps = 4/464 (0%)
Query: 334 SYIAAISSIPEPKTYKVASQDKNWVQAMQSEYEALVQNKTWSLTPRLPSMNVLGCKWVFK 393
S++ I+ EP TY A + W AM E A+ TW + P+ +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 394 VKYNSDGTLERYKARLVAQGYNQQEGIDYQETFSPVVKIQTVRVTLTLTMTHKWFIQQLD 453
+KYNSDGT+ERYKARLVA+GY QQEGID+ ETFSPV K+ +V++ L ++ + + + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 454 VSNAFLHGDLSEVVYMKQPAGFEDPQF----PTHVCQLHKSLYGLKQAPRAWFTRIASYL 509
+SNAFL+GDL E +YMK P G+ Q P VC L KS+YGLKQA R WF + + L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 510 HQWGFKRSSSDTSMFVFYLDGQILIFLLYVDDIILTGSSEFLMKKLVTDLGHEFAMKQLG 569
+GF +S SD + F+ L L+YVDDII+ +++ + +L + L F ++ LG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 570 TLHYFLGIEVQSNSSYLELTQTKYISELLHKSELQDSKPSLIPVSHGKRASKFDGEPIEN 629
L YFLG+E+ +++ + + Q KY +LL ++ L KPS +P+ S G +
Sbjct: 315 PLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVD 374
Query: 630 PLFYRSMVGGLQYATMTRPDIAFAVNYLAQFMQEPSTTHLILLKKVLRYLKGTIGDGIRV 689
YR ++G L Y +TR DI+FAVN L+QF + P H + K+L Y+KGT+G G+
Sbjct: 375 AKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY 434
Query: 690 VPGNIASLSGFSDSDWGSCPDSRRSTSGYCVFLGSTLICWSPKKQLVVSRSSTEAEYRAL 749
L FSD+ + SC D+RRST+GYC+FLG++LI W KKQ VVS+SS EAEYRAL
Sbjct: 435 SSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 750 SLAISEMLWVSYLLKELHVEVQMPMTIFCDNMGAKYLASNHVLH 793
S A EM+W++ +EL + + P +FCDN A ++A+N V H
Sbjct: 495 SFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 218 bits (555), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 150/228 (65%), Gaps = 1/228 (0%)
Query: 533 LIFLLYVDDIILTGSSEFLMKKLVTDLGHEFAMKQLGTLHYFLGIEVQSNSSYLELTQTK 592
+ LLYVDDI+LTGSS L+ L+ L F+MK LG +HYFLGI+++++ S L L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 593 YISELLHKSELQDSKPSLIPVSHGKRASKFDGEPIENPLFYRSMVGGLQYATMTRPDIAF 652
Y ++L+ + + D KP P+ K S +P +RS+VG LQY T+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 653 AVNYLAQFMQEPSTTHLILLKKVLRYLKGTIGDGIRVVPGNIASLSGFSDSDWGSCPDSR 712
AVN + Q M EP+ LLK+VLRY+KGTI G+ + + ++ F DSDW C +R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 713 RSTSGYCVFLGSTLICWSPKKQLVVSRSSTEAEYRALSLAISEMLWVS 760
RST+G+C FLG +I WS K+Q VSRSSTE EYRAL+L +E+ W S
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 122 bits (305), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 7/115 (6%)
Query: 344 EPKTYKVASQDKNWVQAMQSEYEALVQNKTWSLTPRLPSMNVLGCKWVFKVKYNSDGTLE 403
EPK+ A +D W QAMQ E +AL +NKTW L P + N+LGCKWVFK K +SDGTL+
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 404 RYKARLVAQGYNQQEGIDYQETFSPVVKIQTVRVTLTLTMTHKWFIQQLDVSNAF 458
R KARLVA+G++Q+EGI + ET+SPVV+ T+R L + QQL+V +
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVGQSI 134
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 86.7 bits (213), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 642 YATMTRPDIAFAVNYLAQFMQEPSTTHLILLKKVLRYLKGTIGDGIRVVPGNIASLSGFS 701
Y T+TRPD+ FAVN L+QF T + + KVL Y+KGT+G G+ + L F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 702 DSDWGSCPDSRRSTSGYC 719
DSDW SCPD+RRS +G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79