BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0130.1
(215 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 50 3e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 54 FGNIENQ-------INNIISNLLKNNSKYKDILLNARLEELYRLQ--------ESTWKEK 98
FGNI+++ + +I S LL N S D L R+E + R + ES +++K
Sbjct: 384 FGNIQHKTKEALDSLESIQSQLLTNPS---DSLF--RVEHVARKKWNFFAAALESFYRQK 438
Query: 99 SRNDFISLGDKNTKFFHSQAIQRNRSNQILDIKDNNGEWQEDTT---DIFSTFTTHLNKI 155
SR ++ GD NT+FFH + N I ++ ++ E+ T ++ + THL +
Sbjct: 439 SRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHL--L 496
Query: 156 NSTSQVST-DLI--ISNLFPPLFSHSQNTELIVIPDKAEIDLAINWLKKDAVPGPGGYPP 212
S S + T D + I ++ P + + + L +P EI A+ + ++ PGP +
Sbjct: 497 GSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTA 556
Query: 213 YFF 215
FF
Sbjct: 557 EFF 559