BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0200.1
(73 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01670.1 | nudix hydrolase homolog 17 | Chr2:296889-297818 RE... 68 1e-15
AT1G14860.1 | nudix hydrolase homolog 18 | Chr1:5124993-5125805 ... 64 3e-14
AT1G18300.1 | nudix hydrolase homolog 4 | Chr1:6299841-6300799 F... 57 1e-11
AT3G12600.2 | nudix hydrolase homolog 16 | Chr3:4004676-4005995 ... 54 2e-10
AT3G12600.1 | nudix hydrolase homolog 16 | Chr3:4004809-4005995 ... 54 2e-10
>AT2G01670.1 | nudix hydrolase homolog 17 | Chr2:296889-297818
REVERSE LENGTH=182 | 201606
Length = 182
Score = 67.8 bits (164), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 1 MFLLHVQEELESWPEEHVRIRRWMTVNEAREVCQQGWMKEALDKLTLRLTTPQQEEEED 59
MF + V E+LE WPE+HVR R WM V EARE C+ WMKEALD L RL++P + +E+
Sbjct: 113 MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPKEE 171
>AT1G14860.1 | nudix hydrolase homolog 18 | Chr1:5124993-5125805
FORWARD LENGTH=176 | 201606
Length = 176
Score = 63.9 bits (154), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Query: 1 MFLLHVQEELESWPEEHVRIRRWMTVNEAREVCQQGWMKEALDKLTLRLT----TPQQEE 56
MF + V+EELE WPE+H+R R WM V+EAR+ C+ WMKEALD L RL+ P +E+
Sbjct: 108 MFPMLVKEELELWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLSLLSLKPMEED 167
Query: 57 E 57
E
Sbjct: 168 E 168
>AT1G18300.1 | nudix hydrolase homolog 4 | Chr1:6299841-6300799
FORWARD LENGTH=207 | 201606
Length = 207
Score = 57.4 bits (137), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 1 MFLLHVQEELESWPEEHVRIRRWMTVNEAREVCQQGWMKEALDKL 45
MF L V +E E WPE +R RRW++++EAREVCQ WM+EAL+
Sbjct: 149 MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREALEAF 193
>AT3G12600.2 | nudix hydrolase homolog 16 | Chr3:4004676-4005995
FORWARD LENGTH=171 | 201606
Length = 171
Score = 53.9 bits (128), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 1 MFLLHVQEELESWPEEHVRIRRWMTVNEAREVCQQGWMKEAL 42
M+ L+V+EEL +WPE R R+W+T+ EA E C+ WMK+AL
Sbjct: 108 MYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDAL 149
>AT3G12600.1 | nudix hydrolase homolog 16 | Chr3:4004809-4005995
FORWARD LENGTH=180 | 201606
Length = 180
Score = 53.9 bits (128), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 1 MFLLHVQEELESWPEEHVRIRRWMTVNEAREVCQQGWMKEAL 42
M+ L+V+EEL +WPE R R+W+T+ EA E C+ WMK+AL
Sbjct: 117 MYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDAL 158