BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0210.1
(440 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein |... 381 e-129
AT1G70650.2 | Ran BP2/NZF zinc finger-like superfamily protein |... 376 e-125
AT1G48570.1 | zinc finger (Ran-binding) family protein | Chr1:17... 204 1e-60
AT1G55040.1 | zinc finger (Ran-binding) family protein | Chr1:20... 211 2e-60
AT5G17790.1 | zinc finger (Ran-binding) family protein | Chr5:58... 121 2e-29
>AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein |
Chr1:26638158-26640126 FORWARD LENGTH=466 | 201606
Length = 466
Score = 381 bits (978), Expect = e-129, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 280/444 (63%), Gaps = 48/444 (10%)
Query: 1 MELLLKKGYFGISGYPFDLNEMGNKGSNLIRTACLKYGRDRFDLIRYFSRKDIRVVLECG 60
M +L KKGYF S P M +K SN IRTACL + R RF L+R S+KDI+V+ CG
Sbjct: 53 MGMLAKKGYFEESLIPL----MSSKESNHIRTACLNFARHRFTLVRNLSKKDIKVIAGCG 108
Query: 61 CPSTDRKVVNSGKRLRAHVGIHEGNVCSSCSLRGSCERAYVKARPDEGGRTLDVMRILLT 120
CPSTDRKVVNSGKRLRA+VGI EGNVC SC+LRG CERAY +AR DEG RT+DVMR+LLT
Sbjct: 109 CPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTIDVMRLLLT 168
Query: 121 YGLDPVTGSVENKVALNKRVKDSVRKLLTEMVEFNIKELGAAPPRSIPSKRIPSSEHTVW 180
YGLD ++ +VEN+ K V+DSVRKLL E V +++ + +A + + P+S+
Sbjct: 169 YGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFESAETETAGDELQPNSQ---- 224
Query: 181 PQTGHIEVPMKQGDWICPKCSFINFAKNIKCLRCDGFFQERLRKFGEDQ-EHLPLKKGDW 239
+ + GDW C +C F+NFAKNI+CLRCD F +ERL++ E+Q +HLPLKKGDW
Sbjct: 225 -DIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDW 283
Query: 240 ICGTCNFLNFAKNTRCLQCEEKPSKRVLNPGEWECESCNYVNFKRNMVCLKCDWKRPKAS 299
IC TCNFLNF+KNTRCL+C++KP+ R +NPGEWECESCNY+NF+RN +CLKCD KR KA+
Sbjct: 284 ICQTCNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQKAA 343
Query: 300 HYS-DTSQSQNEDKGLHRTYPMNFVRDEVDDSGFSVRQERQSRKTGAEMWSNLENDREED 358
+ + D+ + G+ +T+ +FV +E SV++ + + +
Sbjct: 344 NVTPDSKTVADRQSGVTKTW--SFVEEE------SVKRCNGEEEEEEDGFMG-------- 387
Query: 359 RLSPSNRFSELDDFPILGGKSTISQDPQAREKWKEEMSKIRRTVSWERRHIPEIPKKLEY 418
FP+ GG+S +S+ + RE+WK EM++ R+ + + + E
Sbjct: 388 -------------FPVEGGRSNVSKSAEKREQWKLEMTQRIRSNGTKAKKDDNTKNETES 434
Query: 419 LKLD--------DDDDDDEMADWF 434
D + DD EM DWF
Sbjct: 435 KCYDRRRNELLGNISDDGEMDDWF 458
>AT1G70650.2 | Ran BP2/NZF zinc finger-like superfamily protein |
Chr1:26638158-26641949 FORWARD LENGTH=595 | 201606
Length = 595
Score = 376 bits (965), Expect = e-125, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 267/403 (66%), Gaps = 40/403 (9%)
Query: 1 MELLLKKGYFGISGYPFDLNEMGNKGSNLIRTACLKYGRDRFDLIRYFSRKDIRVVLECG 60
M +L KKGYF S P M +K SN IRTACL + R RF L+R S+KDI+V+ CG
Sbjct: 53 MGMLAKKGYFEESLIPL----MSSKESNHIRTACLNFARHRFTLVRNLSKKDIKVIAGCG 108
Query: 61 CPSTDRKVVNSGKRLRAHVGIHEGNVCSSCSLRGSCERAYVKARPDEGGRTLDVMRILLT 120
CPSTDRKVVNSGKRLRA+VGI EGNVC SC+LRG CERAY +AR DEG RT+DVMR+LLT
Sbjct: 109 CPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTIDVMRLLLT 168
Query: 121 YGLDPVTGSVENKVALNKRVKDSVRKLLTEMVEFNIKELGAAPPRSIPSKRIPSSEHTVW 180
YGLD ++ +VEN+ K V+DSVRKLL E V +++ + +A + + P+S+
Sbjct: 169 YGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFESAETETAGDELQPNSQ---- 224
Query: 181 PQTGHIEVPMKQGDWICPKCSFINFAKNIKCLRCDGFFQERLRKFGEDQ-EHLPLKKGDW 239
+ + GDW C +C F+NFAKNI+CLRCD F +ERL++ E+Q +HLPLKKGDW
Sbjct: 225 -DIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDW 283
Query: 240 ICGTCNFLNFAKNTRCLQCEEKPSKRVLNPGEWECESCNYVNFKRNMVCLKCDWKRPKAS 299
IC TCNFLNF+KNTRCL+C++KP+ R +NPGEWECESCNY+NF+RN +CLKCD KR KA+
Sbjct: 284 ICQTCNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQKAA 343
Query: 300 HYS-DTSQSQNEDKGLHRTYPMNFVRDEVDDSGFSVRQERQSRKTGAEMWSNLENDREED 358
+ + D+ + G+ +T+ +FV +E SV++ + + +
Sbjct: 344 NVTPDSKTVADRQSGVTKTW--SFVEEE------SVKRCNGEEEEEEDGFMG-------- 387
Query: 359 RLSPSNRFSELDDFPILGGKSTISQDPQAREKWKEEMSKIRRT 401
FP+ GG+S +S+ + RE+WK EM++ R+
Sbjct: 388 -------------FPVEGGRSNVSKSAEKREQWKLEMTQRIRS 417
>AT1G48570.1 | zinc finger (Ran-binding) family protein |
Chr1:17955455-17957661 REVERSE LENGTH=455 | 201606
Length = 455
Score = 204 bits (519), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 174/349 (49%), Gaps = 77/349 (22%)
Query: 29 LIRTACLKYGRDRFDLIRYFSRKDIRVVLECGCPSTDRKVVNSGKRLRAHVGIHEGNVCS 88
L++ ACL + RDR+D++R S D++ ++E GCP+ RK VNS KR+RAHV ++EG+VC
Sbjct: 93 LVKDACLSFARDRYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCG 152
Query: 89 SCSLRGSCERAYVKARPDEG-GRTLDVMRILLTYGLDPVTGSVENKVALNKRVKDSVRKL 147
SC LR SC+RAYV + E RT+DVMR+LL LD + S + V +S R+L
Sbjct: 153 SCDLRSSCDRAYVILKDTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRL 212
Query: 148 LTEMVEFNIKELGAAPPR------SIPSK------------------------------- 170
L E+VEF+ K L A P+ S+PSK
Sbjct: 213 LLELVEFSEKPLIPALPKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFK 272
Query: 171 -RIPSSEHTVWPQTGHIEV-----PMKQGDWICPKCSFINFAKNIKCLRCDGFFQER--- 221
R H V ++ + E P+ DW CPKC F+NFA+N +C C+ R
Sbjct: 273 SRNDEPSHRVAFKSRNDESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVA 332
Query: 222 --------------LRKFGEDQEHLP----------------LKKGDWICGTCNFLNFAK 251
F +Q L +KKGDW C C ++NFA
Sbjct: 333 AVVKEGDWLCPECSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFAS 392
Query: 252 NTRCLQCEEKPSKRVLNPGEWECESCNYVNFKRNMVCLKCDWKRPKASH 300
N +C +C E+ K + PG+WEC SC++VNF+RN C KC+ KRP ++
Sbjct: 393 NKQCRECREQRHKTLAEPGDWECPSCDFVNFRRNDACKKCECKRPSQAN 441
>AT1G55040.1 | zinc finger (Ran-binding) family protein |
Chr1:20534895-20538901 FORWARD LENGTH=849 | 201606
Length = 849
Score = 211 bits (538), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 172/322 (53%), Gaps = 71/322 (22%)
Query: 1 MELLLKKGYF---------------GISGYPFDLNEMGNKGSNL------IRTACLKYGR 39
ME L+K+ YF GI L E N G L ++ AC +G+
Sbjct: 156 MERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRAVQNACSNFGK 215
Query: 40 DRFDLIRYFSRKDIRVVLECGCPSTDRKVVNSGKRLRAHVGIHEGNVCSSCSLRGSCERA 99
DRFD++R SR DI++++ GCP+TDRKVV SGK LR V + EG+VCSSCSLR SCE+A
Sbjct: 216 DRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSCSLRNSCEKA 275
Query: 100 YVKARPDEGGRTLDVMRILLTYGLDPVTGSVENKVALNKRVKDSV-RKLLTEMVEFNIKE 158
++ ++ RT+D+MRIL TYG DP+ G+V NK L K+ SV RKLL E+V+
Sbjct: 276 FLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKLLHEIVK----- 330
Query: 159 LGAAP--PRSIPS--KRIPSSEHTVWPQTGHIEVPMKQGDWICPKCSFINFAKNIKCLRC 214
L A P P P KR P P PK
Sbjct: 331 LSAVPIDPNLTPPVIKRAPPKVKQPPP---------------TPK--------------- 360
Query: 215 DGFFQERLRKFGEDQEHLPLKKGDWICGTCNFLNFAKNTRCLQCEEKPSKRVLNPGEWEC 274
R+ G D + +KKGDW+C C+F+NFAKNT CLQC+ K KR L PGEWEC
Sbjct: 361 --------RRVGRDD--VEMKKGDWLCPKCDFMNFAKNTICLQCDAKRPKRQLLPGEWEC 410
Query: 275 ESCNYVNFKRNMVCLKCDWKRP 296
CN++N++RNM C CD KRP
Sbjct: 411 PECNFLNYRRNMACFHCDCKRP 432
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Query: 262 PSKRV------LNPGEWECESCNYVNFKRNMVCLKCDWKRPK 297
P +RV + G+W C C+++NF +N +CL+CD KRPK
Sbjct: 359 PKRRVGRDDVEMKKGDWLCPKCDFMNFAKNTICLQCDAKRPK 400
>AT5G17790.1 | zinc finger (Ran-binding) family protein |
Chr5:5869810-5872671 REVERSE LENGTH=758 | 201606
Length = 758
Score = 121 bits (304), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 65/320 (20%)
Query: 1 MELLLKKGYFGISGYPFDLNEMGNKG--SNLIRTA--CLKYGRDRFDLIRYFSRKDIRVV 56
++ L K GYF SG L G L+R A CL R+R +L+ SR+D+ V+
Sbjct: 99 LQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPALACLALARERPELLEMLSRRDVEVL 158
Query: 57 LECGCPSTDRKVVNSGKRLRAHVGIHEGNVCSSCSLRGSCERAYVKARPDEGGRTLDVMR 116
+E G P + +S KR+ S LR + K E T+D+MR
Sbjct: 159 VENGKPFLFKTGPDSLKRM-------------SLYLRSGLQ-GIGKLMDMEKASTVDLMR 204
Query: 117 ILLTYGLDPVTGSVENKVALNKRVKDSVRKLLTEMVEFNIKELGAAPPRSIPSKRIPSSE 176
++L+Y +D V S E+K + ++ SVR LL+++ + +++ PP S
Sbjct: 205 LILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLR-----PPES---------- 248
Query: 177 HTVWPQTGHIEVPMKQGDWICPKCSFINFAKNIKCLRCDGFFQERLRKFGEDQEHLPLKK 236
H + + D DG + +R F Q ++ +K+
Sbjct: 249 ------NVHDTMQNQYSDR-------------------DG---QGVRSF---QNNVEMKR 277
Query: 237 GDWICGTCNFLNFAKNTRCLQCEEKPSKRVLNPGEWECESCNYVNFKRNMVCLKCDWKRP 296
GDWIC C+ +NFA+N +C QC+E KR L EWEC C++ N+ RN+ CL+CD KRP
Sbjct: 278 GDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVACLRCDCKRP 337
Query: 297 KASHYSDTSQSQNEDKGLHR 316
+ S + + + D L R
Sbjct: 338 RDSSLNSANSDYSSDPELER 357