BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0280.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70660.1 | MMS ZWEI homologue 2 | Chr1:26640755-26641949 FORW... 228 8e-78
AT1G23260.1 | MMS ZWEI homologue 1 | Chr1:8257209-8258573 REVERS... 219 2e-74
AT1G70650.2 | Ran BP2/NZF zinc finger-like superfamily protein |... 222 2e-70
AT1G70660.2 | MMS ZWEI homologue 2 | Chr1:26640755-26641981 FORW... 208 2e-70
AT2G36060.3 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVE... 207 5e-70
>AT1G70660.1 | MMS ZWEI homologue 2 | Chr1:26640755-26641949 FORWARD
LENGTH=159 | 201606
Length = 159
Score = 228 bits (580), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 131/159 (82%), Gaps = 13/159 (8%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
MG+E +KV+VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILM+SWTGTI+GP +T ++
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
G+I+QLKLFC +DYP++PPTV FQ+RINM CVN E G+ RE TMED+L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
QLKKEMMS QNRKL+QP EGNEEGR D KGLV+KC ++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159
>AT1G23260.1 | MMS ZWEI homologue 1 | Chr1:8257209-8258573 REVERSE
LENGTH=158 | 201606
Length = 158
Score = 219 bits (557), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 126/159 (79%), Gaps = 14/159 (8%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
M +E KV+VPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M+SWTGTI+GPP+T ++
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
G+I+QLKLFC ++YP++PPTV FQTRINM CVN ETG+ RE TMEDIL
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
+LKKEMM+ NRKL+QPPEGNEE R D KG KC ++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKGPA-KCCVM 158
>AT1G70650.2 | Ran BP2/NZF zinc finger-like superfamily protein |
Chr1:26638158-26641949 FORWARD LENGTH=595 | 201606
Length = 595
Score = 222 bits (566), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 127/154 (82%), Gaps = 13/154 (8%)
Query: 6 DKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHDGRIYQ 65
+++LVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILM+SWTGTI+GP +T ++G+I+Q
Sbjct: 442 NELLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQ 501
Query: 66 LKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDILTQLKK 112
LKLFC +DYP++PPTV FQ+RINM CVN E G+ RE TMED+L QLKK
Sbjct: 502 LKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKK 561
Query: 113 EMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
EMMS QNRKL+QP EGNEEGR D KGLV+KC ++
Sbjct: 562 EMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 595
>AT1G70660.2 | MMS ZWEI homologue 2 | Chr1:26640755-26641981 FORWARD
LENGTH=148 | 201606
Length = 148
Score = 208 bits (530), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 119/144 (82%), Gaps = 13/144 (9%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
MG+E +KV+VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILM+SWTGTI+GP +T ++
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
G+I+QLKLFC +DYP++PPTV FQ+RINM CVN E G+ RE TMED+L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEE 131
QLKKEMMS QNRKL+QP EGNEE
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEE 144
>AT2G36060.3 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVERSE
LENGTH=144 | 201606
Length = 144
Score = 207 bits (528), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 110/137 (80%), Gaps = 12/137 (8%)
Query: 4 EGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHDGRI 63
G V+VPRNFRLLEELERGEKGIGDGTVSYGMDD DDI MRSWTGTIIGP +TVH+GRI
Sbjct: 5 SGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRI 64
Query: 64 YQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM------------RECTMEDILTQLK 111
YQLKLFCD+DYP+ PPTV F +RINMTCVN +TG+ R+ TMEDILTQLK
Sbjct: 65 YQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVDSKKFGVLANWQRQYTMEDILTQLK 124
Query: 112 KEMMSPQNRKLSQPPEG 128
KEM + NRKL QPPEG
Sbjct: 125 KEMAASHNRKLVQPPEG 141