BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0330.1
(359 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 238 3e-77
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 255 1e-76
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 255 1e-76
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 96 4e-24
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 238 bits (606), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 158/228 (69%), Gaps = 1/228 (0%)
Query: 11 MVFLLYVDDIILTGTSASLLDQLFAALAEEFAMKRLGNINYFLGIEVQRTPSSLLLTQTK 70
M LLYVDDI+LTG+S +LL+ L L+ F+MK LG ++YFLGI+++ PS L L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 71 YTLELLDKSGLSDSKPSLVPISAGKRVSKLDGELLDNPIFYRSMVGGLQYATMTRPDLTY 130
Y ++L+ +G+ D KP P+ K S + +P +RS+VG LQY T+TRPD++Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 131 SVNYLSQFMHEPRTAHLILLKKVLRYLKGTIGAGIAIQSGDVSILKGFSDSDWAGCPDTR 190
+VN + Q MHEP A LLK+VLRY+KGTI G+ I ++ F DSDWAGC TR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 191 RSTSGYCVFLGSSLVSWSSKKNTTVSRSSTEAEYRALSMATSELLWLS 238
RST+G+C FLG +++SWS+K+ TVSRSSTE EYRAL++ +EL W S
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 255 bits (651), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 185/297 (62%), Gaps = 1/297 (0%)
Query: 2 FVFTSAGQMMVFLLYVDDIILTGTSASLLDQLFAALAEEFAMKRLGNINYFLGIEVQRTP 61
F+ +A + L+YVDDII+ + + +D+L + L F ++ LG + YFLG+E+ R+
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 62 SSLLLTQTKYTLELLDKSGLSDSKPSLVPISAGKRVSKLDGELLDNPIFYRSMVGGLQYA 121
+ + + Q KY L+LLD++GL KPS VP+ S G + YR ++G L Y
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL 388
Query: 122 TMTRPDLTYSVNYLSQFMHEPRTAHLILLKKVLRYLKGTIGAGIAIQSGDVSILKGFSDS 181
+TR D++++VN LSQF PR AH + K+L Y+KGT+G G+ S L+ FSD+
Sbjct: 389 QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 182 DWAGCPDTRRSTSGYCVFLGSSLVSWSSKKNTTVSRSSTEAEYRALSMATSELLWLSYLL 241
+ C DTRRST+GYC+FLG+SL+SW SKK VS+SS EAEYRALS AT E++WL+
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 242 EELGVSIFAPLSLSCDNMGAKLLASNPVFHARTKHIEIDYHFIRDL-VVNSTLDIKF 297
EL + + P L CDN A +A+N VFH RTKHIE D H +R+ V +TL F
Sbjct: 509 RELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSF 565
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 255 bits (651), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 185/297 (62%), Gaps = 1/297 (0%)
Query: 2 FVFTSAGQMMVFLLYVDDIILTGTSASLLDQLFAALAEEFAMKRLGNINYFLGIEVQRTP 61
F+ +A + L+YVDDII+ + + +D+L + L F ++ LG + YFLG+E+ R+
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 62 SSLLLTQTKYTLELLDKSGLSDSKPSLVPISAGKRVSKLDGELLDNPIFYRSMVGGLQYA 121
+ + + Q KY L+LLD++GL KPS VP+ S G + YR ++G L Y
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL 388
Query: 122 TMTRPDLTYSVNYLSQFMHEPRTAHLILLKKVLRYLKGTIGAGIAIQSGDVSILKGFSDS 181
+TR D++++VN LSQF PR AH + K+L Y+KGT+G G+ S L+ FSD+
Sbjct: 389 QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 182 DWAGCPDTRRSTSGYCVFLGSSLVSWSSKKNTTVSRSSTEAEYRALSMATSELLWLSYLL 241
+ C DTRRST+GYC+FLG+SL+SW SKK VS+SS EAEYRALS AT E++WL+
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 242 EELGVSIFAPLSLSCDNMGAKLLASNPVFHARTKHIEIDYHFIRDL-VVNSTLDIKF 297
EL + + P L CDN A +A+N VFH RTKHIE D H +R+ V +TL F
Sbjct: 509 RELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSF 565
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 95.9 bits (237), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%)
Query: 120 YATMTRPDLTYSVNYLSQFMHEPRTAHLILLKKVLRYLKGTIGAGIAIQSGDVSILKGFS 179
Y T+TRPDLT++VN LSQF RTA + + KVL Y+KGT+G G+ + LK F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 180 DSDWAGCPDTRRSTSGYC 197
DSDWA CPDTRRS +G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79