BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0360.1
(178 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWAR... 58 2e-10
>AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWARD
LENGTH=216 | 201606
Length = 216
Score = 58.2 bits (139), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 42 VFKSRLTINNKVCDFIIDNGSEENMVSSRLVEVLQLQTIDHPVPYKIGWISNQRELSVQK 101
VF+++ IN++ C ++ G+ N++S LV+ L+L+T+ ++ ++ +RE V +
Sbjct: 98 VFRTQCVINDEACRLVLYGGN--NIISKGLVKQLKLKTLKKYPSVRV--MATRREDKVAE 153
Query: 102 Q-CSFSFSIGTHYHDTITCDVVDMDN--CHIIFGRPWIYDVDATHHCRENTFEFPWSRKR 158
+ C SIG Y D +TC VV+M+ ++FG PW+Y V ATH+ R+++ W+
Sbjct: 154 ETCRVPVSIGDFYKDKVTCYVVNMEEEEDQLLFGGPWLYRVQATHNGRDDSCMIIWNHNM 213
Query: 159 IYL 161
I L
Sbjct: 214 ILL 216