BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0500.1
(145 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 56 9e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 51 6e-08
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 56.2 bits (134), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Query: 12 DRPSFWNNLLTRIQGLS----NPYCYLGDLNALSDQKDKFG-GSSNIPF--LTQFQQFIS 64
+R S W+++ TR+ S +P+ +GD N ++ + + SNI L Q +
Sbjct: 100 ERRSLWDDI-TRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMR 158
Query: 65 NTNLLDLGFNGPAYTWTNNKAMHHLTKERLDRVLCDVEWLMCYPEAGVFHLPRYNSDHAP 124
+++L+DL G YTW+N++ + + + +LDR + + WL +P A P +SDHA
Sbjct: 159 DSDLVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDHAA 217
Query: 125 ILLKLIVERQPLQTISKFEVF 145
++ ++ PL F+ F
Sbjct: 218 CMV-ILNNSPPLSKKKSFKYF 237
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 50.8 bits (120), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 34 LGDLNALSDQKDKFGG-SSNIPF--LTQFQQFISNTNLLDLGFNGPAYTWTNNKAMHHLT 90
+GD + ++ D + ++IP L +FQ + +++L+D+ G YTW+N++ + +
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 91 KERLDRVLCDVEWLMCYPEA-GVFHLPRYNSDHAPILLKLIVERQPLQTISKFEVF 145
+ +LDR + + +W +P A VF L SDH+P + +I+E P ++ F F
Sbjct: 284 R-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCI--IILENLPKRSKKCFRYF 335