BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0560.1
(589 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 172 5e-45
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 172 5e-45
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 112 1e-28
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 172 bits (435), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 99 AFLPLLQLPIEPTSYREAAKDTECVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFK 158
+FL + EP++Y EA + AM++E A+ TW + + +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 159 IMQKSDGTIERYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIAVTNSWHIKQLD 218
I SDGTIERYK RLVAKG+ QQEG+D+ +TFSPV K +++++L I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 219 VSNAFIHGTLDEAVYMIQPPGFVQPEKDK----HVCHLHKALFGLKQAPRAWFNKFANFL 274
+SNAF++G LDE +YM PPG+ + D VC+L K+++GLKQA R WF KF+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 275 LAYRFKKS 282
+ + F +S
Sbjct: 255 IGFGFVQS 262
Score = 162 bits (410), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 391 VMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKKNTFKLVEKPKNKKILKNKWVFK 450
V + + EP Y EA + W AM DEI ++ +T+++ P NKK + KWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 451 INTEERNSQPRYKARLVVKGFGQKKGIAFDEIFSPVVKMSSIRLVLGLAANMNLEIEQLD 510
I + RYKARLV KG+ Q++GI F E FSPV K++S++L+L ++A N + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 511 VKTAFLHGDLEKDVYMEQPTGFEVKGKEHL----VCKLEKSLYGLKHAPRQWYKKFESFM 566
+ AFL+GDL++++YM+ P G+ + + L VC L+KS+YGLK A RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 567 KDQGYHRMASDHCVFV 582
G+ + SDH F+
Sbjct: 255 IGFGFVQSHSDHTYFL 270
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 172 bits (435), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 99 AFLPLLQLPIEPTSYREAAKDTECVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFK 158
+FL + EP++Y EA + AM++E A+ TW + + +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 159 IMQKSDGTIERYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIAVTNSWHIKQLD 218
I SDGTIERYK RLVAKG+ QQEG+D+ +TFSPV K +++++L I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 219 VSNAFIHGTLDEAVYMIQPPGFVQPEKDK----HVCHLHKALFGLKQAPRAWFNKFANFL 274
+SNAF++G LDE +YM PPG+ + D VC+L K+++GLKQA R WF KF+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 275 LAYRFKKS 282
+ + F +S
Sbjct: 255 IGFGFVQS 262
Score = 162 bits (410), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 391 VMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKKNTFKLVEKPKNKKILKNKWVFK 450
V + + EP Y EA + W AM DEI ++ +T+++ P NKK + KWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 451 INTEERNSQPRYKARLVVKGFGQKKGIAFDEIFSPVVKMSSIRLVLGLAANMNLEIEQLD 510
I + RYKARLV KG+ Q++GI F E FSPV K++S++L+L ++A N + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 511 VKTAFLHGDLEKDVYMEQPTGFEVKGKEHL----VCKLEKSLYGLKHAPRQWYKKFESFM 566
+ AFL+GDL++++YM+ P G+ + + L VC L+KS+YGLK A RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 567 KDQGYHRMASDHCVFV 582
G+ + SDH F+
Sbjct: 255 IGFGFVQSHSDHTYFL 270
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 112 bits (280), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 68/99 (68%)
Query: 109 EPTSYREAAKDTECVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFKIMQKSDGTIE 168
EP S A KD +AM EE AL NKTW LVP + NILGCKWVFK SDGT++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 169 RYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIA 207
R K RLVAKGFHQ+EG+ + +T+SPVV+ TIR +L +A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
Score = 88.6 bits (218), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 376 TRDRAPSTKYPPHEYVMVTDS--GEPQCYEEAIDDEHKKEWLKAMQDEIESLHKKNTFKL 433
TR +A K P + +T + EP+ A+ D W +AMQ+E+++L + T+ L
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWIL 59
Query: 434 VEKPKNKKILKNKWVFKINTEERNSQPRYKARLVVKGFGQKKGIAFDEIFSPVVKMSSIR 493
V P N+ IL KWVFK + R KARLV KGF Q++GI F E +SPVV+ ++IR
Sbjct: 60 VPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIR 119
Query: 494 LVLGLAANMNLEIEQ 508
+L +A LE+ Q
Sbjct: 120 TILNVAQ--QLEVGQ 132