BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0570.1
(412 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 345 e-109
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 345 e-109
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 249 5e-81
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 98 8e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 74 7e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 345 bits (884), Expect = e-109, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 247/391 (63%), Gaps = 4/391 (1%)
Query: 8 PSQNLVGCKWVFKLKQKSDGSIERYKARLVAKGFHQREGLDYSETFSPVAKPATIRVLLT 67
P++ +GCKWV+K+K SDG+IERYKARLVAKG+ Q+EG+D+ ETFSPV K +++++L
Sbjct: 122 PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 181
Query: 68 LAVQNDWLIKQLDVRDVFLHGKLKEEVYMMQPPGFQ----DKSKPNFVCKLHKSLYGLKQ 123
++ ++ + QLD+ + FL+G L EE+YM PPG+ D PN VC L KS+YGLKQ
Sbjct: 182 ISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ 241
Query: 124 APRAWYEELVDSLLAFSFRKSLSDTSLFVYSEGSTLLYVLVYVDDILVTGNSQSVCASLI 183
A R W+ + +L+ F F +S SD + F+ + L VLVYVDDI++ N+ + L
Sbjct: 242 ASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELK 301
Query: 184 SELSSQFAMKDLGSFHYFLGMEVVRDSTGLFLSQTKYALDLLTKAQMIDAKPCATPLPHG 243
S+L S F ++DLG YFLG+E+ R + G+ + Q KYALDLL + ++ KP + P+
Sbjct: 302 SQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPS 361
Query: 244 IKLTPHEGDLLKDPTYYRSLVGALQYLTWTRPDLSYSVNLVCQFMSKPTHIHLQGVKRIL 303
+ + H G D YR L+G L YL TR D+S++VN + QF P H Q V +IL
Sbjct: 362 VTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
Query: 304 RYLKGTITHGIQFSKSSSLQIQGFANADWAGNSSDSSSTSGFVIYLGNNPISWSAKKQPT 363
Y+KGT+ G+ +S + +Q+Q F++A + ST+G+ ++LG + ISW +KKQ
Sbjct: 422 HYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQV 481
Query: 364 TLRSSTEAEYRSLAHSAPETLWICSLLQDLH 394
+SS EAEYR+L+ + E +W+ ++L
Sbjct: 482 VSKSSAEAEYRALSFATDEMMWLAQFFRELQ 512
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 345 bits (884), Expect = e-109, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 247/391 (63%), Gaps = 4/391 (1%)
Query: 8 PSQNLVGCKWVFKLKQKSDGSIERYKARLVAKGFHQREGLDYSETFSPVAKPATIRVLLT 67
P++ +GCKWV+K+K SDG+IERYKARLVAKG+ Q+EG+D+ ETFSPV K +++++L
Sbjct: 122 PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 181
Query: 68 LAVQNDWLIKQLDVRDVFLHGKLKEEVYMMQPPGFQ----DKSKPNFVCKLHKSLYGLKQ 123
++ ++ + QLD+ + FL+G L EE+YM PPG+ D PN VC L KS+YGLKQ
Sbjct: 182 ISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ 241
Query: 124 APRAWYEELVDSLLAFSFRKSLSDTSLFVYSEGSTLLYVLVYVDDILVTGNSQSVCASLI 183
A R W+ + +L+ F F +S SD + F+ + L VLVYVDDI++ N+ + L
Sbjct: 242 ASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELK 301
Query: 184 SELSSQFAMKDLGSFHYFLGMEVVRDSTGLFLSQTKYALDLLTKAQMIDAKPCATPLPHG 243
S+L S F ++DLG YFLG+E+ R + G+ + Q KYALDLL + ++ KP + P+
Sbjct: 302 SQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPS 361
Query: 244 IKLTPHEGDLLKDPTYYRSLVGALQYLTWTRPDLSYSVNLVCQFMSKPTHIHLQGVKRIL 303
+ + H G D YR L+G L YL TR D+S++VN + QF P H Q V +IL
Sbjct: 362 VTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
Query: 304 RYLKGTITHGIQFSKSSSLQIQGFANADWAGNSSDSSSTSGFVIYLGNNPISWSAKKQPT 363
Y+KGT+ G+ +S + +Q+Q F++A + ST+G+ ++LG + ISW +KKQ
Sbjct: 422 HYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQV 481
Query: 364 TLRSSTEAEYRSLAHSAPETLWICSLLQDLH 394
+SS EAEYR+L+ + E +W+ ++L
Sbjct: 482 VSKSSAEAEYRALSFATDEMMWLAQFFRELQ 512
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 249 bits (636), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 162/226 (71%), Gaps = 1/226 (0%)
Query: 160 LYVLVYVDDILVTGNSQSVCASLISELSSQFAMKDLGSFHYFLGMEVVRDSTGLFLSQTK 219
+Y+L+YVDDIL+TG+S ++ LI +LSS F+MKDLG HYFLG+++ +GLFLSQTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 220 YALDLLTKAQMIDAKPCATPLPHGIKLTPHEGDLLKDPTYYRSLVGALQYLTWTRPDLSY 279
YA +L A M+D KP +TPLP + + DP+ +RS+VGALQYLT TRPD+SY
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISY 119
Query: 280 SVNLVCQFMSKPTHIHLQGVKRILRYLKGTITHGIQFSKSSSLQIQGFANADWAGNSSDS 339
+VN+VCQ M +PT +KR+LRY+KGTI HG+ K+S L +Q F ++DWAG +S
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 340 SSTSGFVIYLGNNPISWSAKKQPTTLRSSTEAEYRSLAHSAPETLW 385
ST+GF +LG N ISWSAK+QPT RSSTE EYR+LA +A E W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 97.8 bits (242), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 56/70 (80%)
Query: 2 VLVPPHPSQNLVGCKWVFKLKQKSDGSIERYKARLVAKGFHQREGLDYSETFSPVAKPAT 61
+LVPP +QN++GCKWVFK K SDG+++R KARLVAKGFHQ EG+ + ET+SPV + AT
Sbjct: 58 ILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTAT 117
Query: 62 IRVLLTLAVQ 71
IR +L +A Q
Sbjct: 118 IRTILNVAQQ 127
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 73.6 bits (179), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 269 YLTWTRPDLSYSVNLVCQFMSKPTHIHLQGVKRILRYLKGTITHGIQFSKSSSLQIQGFA 328
YLT TRPDL+++VN + QF S +Q V ++L Y+KGT+ G+ +S +S LQ++ FA
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 329 NADWAGNSSDSSSTSGF 345
++DWA S +GF
Sbjct: 62 DSDWASCPDTRRSVTGF 78