BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0580.1
(382 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 6e-07
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 180 HRHLLDLTRTLLVQSSLSQSFWLEALHTTTYLVNRLPLQVLQSVSPLEKLFYSPPDYDFL 239
+R +++ R++L + L ++F +A +T +++N+ P + P E F S P Y +L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 240 KVFGCACYPWLRPYVKNKLDPRSKE 264
+ FGC Y + KL PR+K+
Sbjct: 62 RRFGCVAYIHCD---EGKLKPRAKK 83