BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0610.1
(264 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06410.1 | DNAJ heat shock N-terminal domain-containing prote... 248 2e-82
>AT5G06410.1 | DNAJ heat shock N-terminal domain-containing protein
| Chr5:1959719-1961132 REVERSE LENGTH=252 | 201606
Length = 252
Score = 248 bits (632), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 152/204 (74%), Gaps = 5/204 (2%)
Query: 61 LSVRHFCSSDGSLDKCWNCGSISVSKPFLACESCKSVQPVSSSVNYFQIFGLEKIFNIEE 120
S R FCS G+ CWNCG + FL C SC+S+QPV SV+YFQIFGLEK + I+
Sbjct: 54 FSGRVFCSESGA--GCWNCGEKAA---FLFCNSCRSIQPVDDSVDYFQIFGLEKKYEIDP 108
Query: 121 TNLERIYKDWQKKLHPDLVHTKSEKEKEYAAEQSARVIDAYRTLRKPLSRAIYLLRLEGV 180
+LE YKDWQKKLHPDLVH KS+KE++YAAEQSA+V +A RTL K LSRA+Y+++L GV
Sbjct: 109 GSLEGKYKDWQKKLHPDLVHNKSKKERDYAAEQSAKVTEACRTLTKRLSRAMYIMKLNGV 168
Query: 181 HVDEERTVSDPELLAEIMEIREAVEEAGNSEILKQIQVQVLEKLETWSKSFGNALRDKKF 240
+V+EE T++DP LL EIME+REA+ EA +S L QI+ QV EKL+ WS SF A +KF
Sbjct: 169 NVNEEETITDPTLLMEIMELREAISEADDSTSLNQIRSQVQEKLKQWSDSFVEAFESQKF 228
Query: 241 EDAVTSIQRMTYYDRINEEIVKKF 264
+DAV IQRMTYY+R EEI+KK
Sbjct: 229 DDAVKCIQRMTYYERACEEILKKL 252