BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0620.1
(213 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75980.1 | Single hybrid motif superfamily protein | Chr1:285... 235 1e-78
AT1G75980.2 | Single hybrid motif superfamily protein | Chr1:285... 147 6e-45
>AT1G75980.1 | Single hybrid motif superfamily protein |
Chr1:28522936-28524302 REVERSE LENGTH=225 | 201606
Length = 225
Score = 235 bits (600), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Query: 44 LNVSDFCNLPPVPPSATDCNFVSYFAPDFMKPGHDQYVYRHPNGLCVIGLASTHVALR-E 102
L +SD LP PPSAT NFVSYF DF K GHDQY+YRH NGLCVIGLA TH+A + E
Sbjct: 54 LLLSDIGELPISPPSATQVNFVSYFITDFTKSGHDQYIYRHANGLCVIGLAPTHIAFKDE 113
Query: 103 KGVVTVDFNVGKSDRSEIKVSGKRKRNAQHFEPSTVLCKVLKDDTFYIVRCCVKGALLEV 162
G+ +VDFNVGKSDRS +KVSGKRK+NA E +T LCKV YIVRCCVKG+LLEV
Sbjct: 114 GGITSVDFNVGKSDRSVLKVSGKRKKNALRSESNTALCKVSTAKDTYIVRCCVKGSLLEV 173
Query: 163 NERLIKHPELLSSSADREGYVAIVMPKPNDWLKVKNQLLSLEEFKK 208
NERLIK PELL+S+ADREGY+AI+MP+P DW K K L++LEE+K+
Sbjct: 174 NERLIKQPELLNSTADREGYIAIIMPRPADWTKNKESLITLEEYKE 219
>AT1G75980.2 | Single hybrid motif superfamily protein |
Chr1:28523358-28524302 REVERSE LENGTH=173 | 201606
Length = 173
Score = 147 bits (372), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 44 LNVSDFCNLPPVPPSATDCNFVSYFAPDFMKPGHDQYVYRHPNGLCVIGLASTHVALR-E 102
L +SD LP PPSAT NFVSYF DF K GHDQY+YRH NGLCVIGLA TH+A + E
Sbjct: 54 LLLSDIGELPISPPSATQVNFVSYFITDFTKSGHDQYIYRHANGLCVIGLAPTHIAFKDE 113
Query: 103 KGVVTVDFNVGKSDRSEIKVSGKRKRNAQHFEPSTVLCKVLKDDTFYIVRCCVKG 157
G+ +VDFNVGKSDRS +KVSGKRK+NA E +T LCKV YIVR + G
Sbjct: 114 GGITSVDFNVGKSDRSVLKVSGKRKKNALRSESNTALCKVSTAKDTYIVRLSLGG 168