BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0670.1
(153 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09270.3 | importin alpha isoform 4 | Chr1:2995162-2997833 FO... 133 2e-37
AT1G09270.2 | importin alpha isoform 4 | Chr1:2994506-2997833 FO... 134 3e-37
AT1G09270.1 | importin alpha isoform 4 | Chr1:2994506-2997833 FO... 134 3e-37
AT4G16143.2 | importin alpha isoform 2 | Chr4:9134450-9137134 RE... 127 7e-35
AT4G16143.1 | importin alpha isoform 2 | Chr4:9134450-9137134 RE... 127 7e-35
>AT1G09270.3 | importin alpha isoform 4 | Chr1:2995162-2997833
FORWARD LENGTH=456 | 201606
Length = 456
Score = 133 bits (335), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 80/139 (57%), Gaps = 44/139 (31%)
Query: 35 FERITPIEEVIKAGVVPRFVEFLEKHDQPQLQ---------------------------- 66
ER PI+EVIKAGV+PRFVEFL +HD PQLQ
Sbjct: 27 IERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP 86
Query: 67 ----------------AVWVVGNAAGDSPNSRDLVLSEGALVPLLSQLNENSKSSILRNT 110
AVW +GN AGDSPN R+LVL+ GAL PLL+QLNENSK S+LRN
Sbjct: 87 IFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNA 146
Query: 111 TWALSNFCRGKPPAPFNQV 129
TW LSNFCRGKPP PF QV
Sbjct: 147 TWTLSNFCRGKPPTPFEQV 165
Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 41 IEEVIKAGVVPRFVEFLEKHDQPQ--LQAVWVVGNAAGDSPNSRDLVLSEGALVPLLSQL 98
I+ VI+AGV PR VE L H P + A+ VGN + ++ G L L + L
Sbjct: 202 IQAVIEAGVCPRLVELL-GHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPHLYNLL 260
Query: 99 NENSKSSILRNTTWALSNFCRG 120
+N K SI + W +SN G
Sbjct: 261 TQNHKKSIKKEACWTISNITAG 282
>AT1G09270.2 | importin alpha isoform 4 | Chr1:2994506-2997833
FORWARD LENGTH=538 | 201606
Length = 538
Score = 134 bits (336), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 80/139 (57%), Gaps = 44/139 (31%)
Query: 35 FERITPIEEVIKAGVVPRFVEFLEKHDQPQLQ---------------------------- 66
ER PI+EVIKAGV+PRFVEFL +HD PQLQ
Sbjct: 109 IERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP 168
Query: 67 ----------------AVWVVGNAAGDSPNSRDLVLSEGALVPLLSQLNENSKSSILRNT 110
AVW +GN AGDSPN R+LVL+ GAL PLL+QLNENSK S+LRN
Sbjct: 169 IFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNA 228
Query: 111 TWALSNFCRGKPPAPFNQV 129
TW LSNFCRGKPP PF QV
Sbjct: 229 TWTLSNFCRGKPPTPFEQV 247
Score = 47.0 bits (110), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 41 IEEVIKAGVVPRFVEFLEKHDQPQ--LQAVWVVGNAAGDSPNSRDLVLSEGALVPLLSQL 98
I+ VI+AGV PR VE L H P + A+ VGN + ++ G L L + L
Sbjct: 284 IQAVIEAGVCPRLVELL-GHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPHLYNLL 342
Query: 99 NENSKSSILRNTTWALSNFCRG 120
+N K SI + W +SN G
Sbjct: 343 TQNHKKSIKKEACWTISNITAG 364
>AT1G09270.1 | importin alpha isoform 4 | Chr1:2994506-2997833
FORWARD LENGTH=538 | 201606
Length = 538
Score = 134 bits (336), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 80/139 (57%), Gaps = 44/139 (31%)
Query: 35 FERITPIEEVIKAGVVPRFVEFLEKHDQPQLQ---------------------------- 66
ER PI+EVIKAGV+PRFVEFL +HD PQLQ
Sbjct: 109 IERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP 168
Query: 67 ----------------AVWVVGNAAGDSPNSRDLVLSEGALVPLLSQLNENSKSSILRNT 110
AVW +GN AGDSPN R+LVL+ GAL PLL+QLNENSK S+LRN
Sbjct: 169 IFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNA 228
Query: 111 TWALSNFCRGKPPAPFNQV 129
TW LSNFCRGKPP PF QV
Sbjct: 229 TWTLSNFCRGKPPTPFEQV 247
Score = 47.0 bits (110), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 41 IEEVIKAGVVPRFVEFLEKHDQPQ--LQAVWVVGNAAGDSPNSRDLVLSEGALVPLLSQL 98
I+ VI+AGV PR VE L H P + A+ VGN + ++ G L L + L
Sbjct: 284 IQAVIEAGVCPRLVELL-GHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPHLYNLL 342
Query: 99 NENSKSSILRNTTWALSNFCRG 120
+N K SI + W +SN G
Sbjct: 343 TQNHKKSIKKEACWTISNITAG 364
>AT4G16143.2 | importin alpha isoform 2 | Chr4:9134450-9137134
REVERSE LENGTH=535 | 201606
Length = 535
Score = 127 bits (319), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 78/139 (56%), Gaps = 44/139 (31%)
Query: 35 FERITPIEEVIKAGVVPRFVEFLEKHDQPQLQ---------------------------- 66
ER PIEEVI AGVVPRFVEFL + D PQLQ
Sbjct: 107 IERSPPIEEVIDAGVVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVP 166
Query: 67 ----------------AVWVVGNAAGDSPNSRDLVLSEGALVPLLSQLNENSKSSILRNT 110
AVW +GN AGDSP RDLVL +GAL+PLLSQLNE++K S+LRN
Sbjct: 167 IFVQLLASQSDDVREQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNA 226
Query: 111 TWALSNFCRGKPPAPFNQV 129
TW LSNFCRGKP PF+QV
Sbjct: 227 TWTLSNFCRGKPQPPFDQV 245
Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 41 IEEVIKAGVVPRFVEFLEKHDQPQ--LQAVWVVGNAAGDSPNSRDLVLSEGALVPLLSQL 98
I+ VI+AGVVPR VE L+ H P + A+ +GN V+S GAL+ LLS L
Sbjct: 282 IQSVIEAGVVPRLVELLQ-HQSPSVLIPALRSIGNIVTGDDLQTQCVISHGALLSLLSLL 340
Query: 99 NENSKSSILRNTTWALSNFCRG 120
N K SI + W +SN G
Sbjct: 341 THNHKKSIKKEACWTISNITAG 362
>AT4G16143.1 | importin alpha isoform 2 | Chr4:9134450-9137134
REVERSE LENGTH=535 | 201606
Length = 535
Score = 127 bits (319), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 78/139 (56%), Gaps = 44/139 (31%)
Query: 35 FERITPIEEVIKAGVVPRFVEFLEKHDQPQLQ---------------------------- 66
ER PIEEVI AGVVPRFVEFL + D PQLQ
Sbjct: 107 IERSPPIEEVIDAGVVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVP 166
Query: 67 ----------------AVWVVGNAAGDSPNSRDLVLSEGALVPLLSQLNENSKSSILRNT 110
AVW +GN AGDSP RDLVL +GAL+PLLSQLNE++K S+LRN
Sbjct: 167 IFVQLLASQSDDVREQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNA 226
Query: 111 TWALSNFCRGKPPAPFNQV 129
TW LSNFCRGKP PF+QV
Sbjct: 227 TWTLSNFCRGKPQPPFDQV 245
Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 41 IEEVIKAGVVPRFVEFLEKHDQPQ--LQAVWVVGNAAGDSPNSRDLVLSEGALVPLLSQL 98
I+ VI+AGVVPR VE L+ H P + A+ +GN V+S GAL+ LLS L
Sbjct: 282 IQSVIEAGVVPRLVELLQ-HQSPSVLIPALRSIGNIVTGDDLQTQCVISHGALLSLLSLL 340
Query: 99 NENSKSSILRNTTWALSNFCRG 120
N K SI + W +SN G
Sbjct: 341 THNHKKSIKKEACWTISNITAG 362