BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0690.1
(741 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11760.1 | structural maintenance of chromosomes flexible hin... 754 0.0
AT5G04860.1 | splicing factor 3A subunit | Chr5:1411760-1414459 ... 604 0.0
AT5G04860.2 | splicing factor 3A subunit | Chr5:1411760-1413826 ... 505 e-171
AT2G25460.2 | EEIG1/EHBP1 protein amino-terminal domain protein ... 242 4e-71
AT2G10560.1 | chaperone | Chr2:4109862-4110698 REVERSE LENGTH=27... 230 8e-70
>AT3G11760.1 | structural maintenance of chromosomes flexible hinge
domain protein | Chr3:3718529-3721123 FORWARD LENGTH=702
| 201606
Length = 702
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/757 (55%), Positives = 524/757 (69%), Gaps = 87/757 (11%)
Query: 1 MVVKM-RW-PWPPPLSKKFEVKIVINRLEEFNLGVIEGEKQSVEFTKLSVEIRWKGPKLG 58
MVVKM +W PWPP +++K+EVK+ + +LE ++L V EG + +L+VEIRWKGPK
Sbjct: 1 MVVKMMKWRPWPPLVTRKYEVKLSVKKLEGWDL-VREGVPEK---DRLTVEIRWKGPKAT 56
Query: 59 LSRFRRSVKRNFTKEVEVMKRDDCVIEW-NEDFQSVCNFSAFKENLFHPWEISFAVL-NS 116
L RRSVKRNFTKE V + D V+ W +E+FQS+C+ +++K++LF+PWEI+F+V N
Sbjct: 57 LGSLRRSVKRNFTKEA-VGESD--VVSWEDEEFQSLCSLTSYKDSLFYPWEITFSVFTNG 113
Query: 117 SNQGLKNKVSVIGTACLNLAEFASSAAKKEVEVKIPLSVPDGSA-DSHPCLCLSLRLLEL 175
QG KNK V+GTA LNLAE+A KKE ++ IPL++ A ++HP L +SL LLEL
Sbjct: 114 MKQGQKNKAPVVGTAFLNLAEYACVTDKKEFDINIPLTLSACVASETHPLLFVSLSLLEL 173
Query: 176 TTIQEPSESAQRSVIPDPLSPE------PEILPAEKDELSALKAGLRKVKILKDYVSNRK 229
T E S+SA ++ + P E EK+++SA+KAGLRKVKI ++VS RK
Sbjct: 174 RTTPETSDSAAQTAVVPLPLPSPSPQQPTETHSVEKEDVSAIKAGLRKVKIFTEFVSTRK 233
Query: 230 AKKIFREEDGSEGRCSLRSDDDEYVFPFDTDSLDDCDERRLGVEDGSNVRKSFSYGTLAY 289
AKK REE+G D++ FD G E+ ++RKSFSYG L+Y
Sbjct: 234 AKKACREEEGRFSSFESSESLDDFETDFDE-----------GKEELMSMRKSFSYGPLSY 282
Query: 290 ANCVGGSYISEMRINDENEDLIYYSNRKSDVG--CVNVEDSSVP-VSDQSLLQSSKRRSI 346
AN VG S +++DE+ED +YYS+RKSDVG C + EDS+ V + SLL RRSI
Sbjct: 283 ANGVGTSLNCGAKVSDEDEDWVYYSHRKSDVGAGCSDAEDSAAGLVYEASLL---PRRSI 339
Query: 347 LSWKKRKLNFRSPKAKGEPLLKKAYAEEGGDDIDYDRRQLSSSDESTALARLKSDEDSAA 406
L W+KRKL+FRSPK+KGEPLLKK EEGGDDID+DRRQLSS DE+ K DEDS+A
Sbjct: 340 LPWRKRKLSFRSPKSKGEPLLKKDNGEEGGDDIDFDRRQLSS-DEAHPPFGSKIDEDSSA 398
Query: 407 N-RSSISEFGDDNFAIGSWEQKEFVSRDGHMKLETQVFLASIDQRSERAAGESACTALVA 465
N R+S SEFG+D+FAIGSWE+KE +SRDGHMKL+T VFLASIDQRSERAAGESACTALVA
Sbjct: 399 NPRTSFSEFGEDSFAIGSWEEKEVISRDGHMKLQTSVFLASIDQRSERAAGESACTALVA 458
Query: 466 VISNWFQANRDSMPIKSQFDILIREGSLEWRNLCENEKYREKFPDKHFDLETVLEANIRP 525
VI++WFQ N + MPIKSQFD LIREGSLEWRNLCENE Y +KFPDKHFDL+TVL+A IRP
Sbjct: 459 VIADWFQKNGNLMPIKSQFDSLIREGSLEWRNLCENETYMQKFPDKHFDLDTVLQAKIRP 518
Query: 526 ISIASEKSFIGFFYPEG-IEGGDFEFLQGAMSFDSIWDEISHGNTKCSSNGE-------P 577
+++ KSF+GFF+P+G I G FEFLQGAMSFDSIW EI + S+NG+ P
Sbjct: 519 LTVIPGKSFVGFFHPDGMINEGRFEFLQGAMSFDSIWAEII-SLEESSANGDSYDDDSPP 577
Query: 578 QIYIVSWNDHFFILKVEPEAYYIIDTLGERLYEGCNQAYILKFDRNTIIHKVPEEEVEKS 637
+YIVSWNDHFF+LKVE EAYYIIDTLGERLYEGC+QAY+LKFD T+IHK+ E S
Sbjct: 578 HVYIVSWNDHFFVLKVEKEAYYIIDTLGERLYEGCDQAYVLKFDHKTVIHKILHTEEAGS 637
Query: 638 LKEKQAVDQQIIASTTDTRNQRRPNEEPSANSSLVKLQEPKESEGKEEVVCQGIESCKEY 697
ESE + E++ +G ESCKEY
Sbjct: 638 -----------------------------------------ESEPESEILSRGKESCKEY 656
Query: 698 IKSFLAAIPIRELQVDIKKGLKSSTPIHHRLQIEFHY 734
IK+FLAAIPIRELQ DIKKGL S+ P+HHRLQIEFHY
Sbjct: 657 IKNFLAAIPIRELQEDIKKGLASTAPVHHRLQIEFHY 693
>AT5G04860.1 | splicing factor 3A subunit | Chr5:1411760-1414459
REVERSE LENGTH=782 | 201606
Length = 782
Score = 604 bits (1558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/774 (49%), Positives = 500/774 (64%), Gaps = 84/774 (10%)
Query: 1 MVVKM----RWP-WPPPLSKKFEVKIVINRLEEFNLGVIEGEKQSVEFTKLS-------- 47
MVVKM RWP WPP + KF+V +V+++++ G+++ + + T S
Sbjct: 1 MVVKMKQIMRWPPWPPLFAVKFDVIVVVHQMD----GLLDSDGGGDDSTDQSQRGGGTTT 56
Query: 48 -----VEIRWKGPKLGLSRFRRSVKRNFTKEVEVMKRDDCVIEWNEDFQSVCNFSAFKEN 102
VEI+WKGPK +RSV RN T+E R D V+EWNE+F+ VC FS +KE
Sbjct: 57 RKRPVVEIKWKGPKS--VTLKRSVVRNLTEEGGF--RGDGVVEWNEEFKRVCEFSVYKEG 112
Query: 103 LFHPWEISFAVLNSSNQGLKNKVSVIGTACLNLAEFASSAAKKEVEVKIPLSVPDGSADS 162
F PW +S V + NQG K KV G A LN+AE+ S + +V+VK+PL D S+
Sbjct: 113 SFLPWFVSLTVFSGLNQGSKEKVRSFGKASLNIAEYFSLMKEDDVQVKVPLKDCDSSSVR 172
Query: 163 HPCLCLSLRLLELTTIQEPSESAQRSVIP---DPLSPEPEILPAEKDELSALKAGLRKVK 219
P + +SL+ ++ E QRS +P PLS E AEK E S +K GLRK+K
Sbjct: 173 SPHVHISLQFSPKESLPE----RQRSALPVLWSPLSAE-----AEKAE-SVVKVGLRKMK 222
Query: 220 ILKDYVSNRKAKKIFREEDGSEGRCSL-----RSDDDEYVFPFDTDSLDD---CDERRLG 271
+ +S+ +A + E+DGS G S R+ D + +PFDTDSLD+ DE
Sbjct: 223 TFNNCMSSTQASEKESEKDGSSGSGSDGKSPERNLDSDSSYPFDTDSLDEGDAADESEEN 282
Query: 272 VEDGSNVRKSFSYGTLAYANCVGGSYISEMRINDENEDLIYYSNRK--SDVGCVNVEDSS 329
E+ S++ +Y TL AN GS+ N E+EDLIYYS+R ++ G + E S+
Sbjct: 283 KENESSLADPVNYKTLRSANWARGSF--HTVTNPEDEDLIYYSHRSPLAETGHCSDEVSN 340
Query: 330 VPVS-DQSLLQSSKRRSILSWKKRKLNFRSPKAKGEPLLKKAYAEEGGDDIDYDRRQLSS 388
VS +Q+ Q SK+R +LSWKKRKL+FRSPK KGEPLLKK EEGGDDID+DRRQLSS
Sbjct: 341 DVVSLEQAKGQMSKKR-MLSWKKRKLSFRSPKQKGEPLLKKDCLEEGGDDIDFDRRQLSS 399
Query: 389 SDESTALARLKSDEDSAANRSSISEFGDDNFAIGSWEQKEFVSRDGHMKLETQVFLASID 448
SDES + +SD+ A +S+FGDD+F +GSWE KE +SRDG MKL +VFLASID
Sbjct: 400 SDESNS-DWYRSDD---AIMKPLSQFGDDDFVVGSWETKEIISRDGLMKLTARVFLASID 455
Query: 449 QRSERAAGESACTALVAVISNWFQANRDSMPIKSQFDILIREGSLEWRNLCENEKYREKF 508
QRSERAAGESACTALVAV+++W +NRD +P +S+FD LIREGS EWRN+CENE+YRE+F
Sbjct: 456 QRSERAAGESACTALVAVMAHWLGSNRDIIPTRSEFDSLIREGSSEWRNMCENEEYRERF 515
Query: 509 PDKHFDLETVLEANIRPISIASEKSFIGFFYP------EGIEGGDFEFLQGAMSFDSIWD 562
PDKHFDLETVL+A +RPI + E+SFIGFF+P EG E +FL+G MSFDSIW+
Sbjct: 516 PDKHFDLETVLQAKVRPICVVPERSFIGFFHPEKSEEEEGKEDASLDFLKGVMSFDSIWE 575
Query: 563 EISHGNTKCSSNGEPQIYIVSWNDHFFILKVEPEAYYIIDTLGERLYEGCNQAYILKFDR 622
E+ + S++ EP IYIVSWNDHFF+L V +AYYIIDTLGERLYEGCNQAY+LKFD+
Sbjct: 576 ELMKQEPEESAS-EPVIYIVSWNDHFFVLLVNHDAYYIIDTLGERLYEGCNQAYVLKFDK 634
Query: 623 NTIIHKVPEEEVEKSLKEKQAVDQQIIASTTDTRNQRRPNEEPSANSSLVKLQEPKESEG 682
+ I ++P +K+ +A D NQ++ + S K E +
Sbjct: 635 DAEIKRLP-----SVIKDNKA----------DMGNQKQGGKNKSEQPERSKES---EEQE 676
Query: 683 KEEVVCQGIESCKEYIKSFLAAIPIRELQVDIKKGLKSSTPIHHRLQIEFHYIE 736
+EEVVC+G ESC+EYIKSFLAAIPI++++ D+KKGL SS +HHRLQIE HY +
Sbjct: 677 EEEVVCRGKESCREYIKSFLAAIPIQQVKADMKKGLVSS--LHHRLQIELHYTK 728
>AT5G04860.2 | splicing factor 3A subunit | Chr5:1411760-1413826
REVERSE LENGTH=631 | 201606
Length = 631
Score = 505 bits (1300), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/611 (51%), Positives = 408/611 (66%), Gaps = 58/611 (9%)
Query: 146 EVEVKIPLSVPDGSADSHPCLCLSLRLLELTTIQEPSESAQRSVIP---DPLSPEPEILP 202
+V+VK+PL D S+ P + +SL+ ++ E QRS +P PLS E
Sbjct: 5 DVQVKVPLKDCDSSSVRSPHVHISLQFSPKESLPE----RQRSALPVLWSPLSAE----- 55
Query: 203 AEKDELSALKAGLRKVKILKDYVSNRKAKKIFREEDGSEGRCSL-----RSDDDEYVFPF 257
AEK E S +K GLRK+K + +S+ +A + E+DGS G S R+ D + +PF
Sbjct: 56 AEKAE-SVVKVGLRKMKTFNNCMSSTQASEKESEKDGSSGSGSDGKSPERNLDSDSSYPF 114
Query: 258 DTDSLDD---CDERRLGVEDGSNVRKSFSYGTLAYANCVGGSYISEMRINDENEDLIYYS 314
DTDSLD+ DE E+ S++ +Y TL AN GS+ N E+EDLIYYS
Sbjct: 115 DTDSLDEGDAADESEENKENESSLADPVNYKTLRSANWARGSF--HTVTNPEDEDLIYYS 172
Query: 315 NRK--SDVGCVNVEDSSVPVS-DQSLLQSSKRRSILSWKKRKLNFRSPKAKGEPLLKKAY 371
+R ++ G + E S+ VS +Q+ Q SK+R +LSWKKRKL+FRSPK KGEPLLKK
Sbjct: 173 HRSPLAETGHCSDEVSNDVVSLEQAKGQMSKKR-MLSWKKRKLSFRSPKQKGEPLLKKDC 231
Query: 372 AEEGGDDIDYDRRQLSSSDESTALARLKSDEDSAANRSSISEFGDDNFAIGSWEQKEFVS 431
EEGGDDID+DRRQLSSSDES + +SD+ A +S+FGDD+F +GSWE KE +S
Sbjct: 232 LEEGGDDIDFDRRQLSSSDESNS-DWYRSDD---AIMKPLSQFGDDDFVVGSWETKEIIS 287
Query: 432 RDGHMKLETQVFLASIDQRSERAAGESACTALVAVISNWFQANRDSMPIKSQFDILIREG 491
RDG MKL +VFLASIDQRSERAAGESACTALVAV+++W +NRD +P +S+FD LIREG
Sbjct: 288 RDGLMKLTARVFLASIDQRSERAAGESACTALVAVMAHWLGSNRDIIPTRSEFDSLIREG 347
Query: 492 SLEWRNLCENEKYREKFPDKHFDLETVLEANIRPISIASEKSFIGFFYP------EGIEG 545
S EWRN+CENE+YRE+FPDKHFDLETVL+A +RPI + E+SFIGFF+P EG E
Sbjct: 348 SSEWRNMCENEEYRERFPDKHFDLETVLQAKVRPICVVPERSFIGFFHPEKSEEEEGKED 407
Query: 546 GDFEFLQGAMSFDSIWDEISHGNTKCSSNGEPQIYIVSWNDHFFILKVEPEAYYIIDTLG 605
+FL+G MSFDSIW+E+ + S EP IYIVSWNDHFF+L V +AYYIIDTLG
Sbjct: 408 ASLDFLKGVMSFDSIWEELMKQEPE-ESASEPVIYIVSWNDHFFVLLVNHDAYYIIDTLG 466
Query: 606 ERLYEGCNQAYILKFDRNTIIHKVPEEEVEKSLKEKQAVDQQIIASTTDTRNQRRPNEEP 665
ERLYEGCNQAY+LKFD++ I ++P +K+ +A D NQ++ +
Sbjct: 467 ERLYEGCNQAYVLKFDKDAEIKRLP-----SVIKDNKA----------DMGNQKQGGKNK 511
Query: 666 SANSSLVKLQEPKESEGKEEVVCQGIESCKEYIKSFLAAIPIRELQVDIKKGLKSSTPIH 725
S K E + +EEVVC+G ESC+EYIKSFLAAIPI++++ D+KKGL SS +H
Sbjct: 512 SEQPERSKES---EEQEEEEVVCRGKESCREYIKSFLAAIPIQQVKADMKKGLVSS--LH 566
Query: 726 HRLQIEFHYIE 736
HRLQIE HY +
Sbjct: 567 HRLQIELHYTK 577
>AT2G25460.2 | EEIG1/EHBP1 protein amino-terminal domain protein |
Chr2:10833357-10835374 REVERSE LENGTH=546 | 201606
Length = 546
Score = 242 bits (618), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 191/314 (60%), Gaps = 57/314 (18%)
Query: 424 WEQKEFVSRDGHMKLETQVFLASIDQRSERAAGESACTALVAVISNWFQANRDSM-PIKS 482
W K+ VSRDG KL+++V+LASIDQRSE+AAGE+AC A+ V+++WF AN + P +
Sbjct: 282 WVMKDLVSRDGKSKLKSEVYLASIDQRSEQAAGEAACAAVAVVVAHWFHANPKLINPSGT 341
Query: 483 QFDILIREGSLEWRNLCENEKYREKFPDKHFDLETVLEANIRPISIASEKSFIGFFYPEG 542
FD LI +GS W++LC+ E Y FP++HFDLET++ AN+RP+ + ++KSF G F PE
Sbjct: 342 AFDSLITQGSSLWQSLCDKESYLRLFPNRHFDLETIVSANLRPVRVCTDKSFTGLFSPE- 400
Query: 543 IEGGDFEFLQGAMSFDSIWDEISHGNTKCSSNGEPQIYIVSWNDHFFILKVEPEAYYIID 602
F L G MSFD IWDE+ SSNGE ++YIVSWNDHFF++K + + + +ID
Sbjct: 401 ----RFASLDGLMSFDQIWDEVEKEVALASSNGETRVYIVSWNDHFFVVKADLDGFCVID 456
Query: 603 TLGERLYEGCNQAYILKFDRNTIIHKVPEEEVEKSLKEKQAVDQQIIASTTDTRNQRRPN 662
+LGERL+EGC QAYILKFD ++++++ EE EK
Sbjct: 457 SLGERLFEGCKQAYILKFDDSSLMYE-KEESSEK-------------------------- 489
Query: 663 EEPSANSSLVKLQEPKESEGKEEVVCQGIESCKEYIKSFLAAIPIRELQVDIKKG-LKSS 721
+VC+G + C+EYIKSFLAAIP+ EL +KG +
Sbjct: 490 -----------------------LVCEGKKCCREYIKSFLAAIPVAELAAKEEKGNVVDV 526
Query: 722 TPIHHRLQIEFHYI 735
+ +H RLQI+ H+I
Sbjct: 527 SLLHERLQIDLHHI 540
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 22/183 (12%)
Query: 15 KKFEVKIVINRLEEFNLGVIEGEKQSVEFTKLSVEIRWKGP----KLGLSRFRRS---VK 67
+K V + RL+ L I G++ + + VE++WKGP LG F RS V
Sbjct: 6 RKLHVTVKPVRLD--GLPAILGDETAGKNLSAMVEVKWKGPVSGFGLGFVPFYRSNRPVN 63
Query: 68 RNFTKEVEVMKRDDCVIEWNEDFQSVCNFSAFKENLFHPWEISFAVLNSSNQGLKNKVSV 127
+K + + +EW E+F+ VC + PW +SF V N KNK S+
Sbjct: 64 HTSSKPIALGSNH---VEWEEEFERVCC-------IVGPWNLSFNVFYGENMDAKNKKSL 113
Query: 128 IGTACLNLAEFASSAAKKEVEVKIPLSVPDGSADSHPCLCLSLRLLELTTIQEPSESAQR 187
IG A L+L+E AS + VE K+P+ L +++ E+ T EP + Q
Sbjct: 114 IGKASLDLSELASK-QESTVERKLPIRSKGSVLSKEATLVVNVTFSEVRT--EPDDFMQL 170
Query: 188 SVI 190
I
Sbjct: 171 GQI 173
>AT2G10560.1 | chaperone | Chr2:4109862-4110698 REVERSE LENGTH=278 |
201606
Length = 278
Score = 230 bits (587), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 170/255 (66%), Gaps = 37/255 (14%)
Query: 498 LCENEKYREKFPDKHFDLETVLEANIRPISIASEKSFIGFFYPEGIEGG------DFEFL 551
+CENE+YRE+FPDKHFDLETVL+A +RPI + E++FIGFF+ E + +FL
Sbjct: 1 MCENEEYRERFPDKHFDLETVLQAKVRPICVVPERTFIGFFHREKSKEEEEKEDVSLDFL 60
Query: 552 QGAMSFDSIWDEISHGNTKCSSNGEPQIYIVSWNDHFFILKVEPEAYYIIDTLGERLYEG 611
+G MSFDSIW+EI + S E IYIVSWNDH+F+L V +AYYIIDTLGER+YEG
Sbjct: 61 KGVMSFDSIWEEIMKQEPE-ESASEHVIYIVSWNDHYFVLLVNHDAYYIIDTLGERVYEG 119
Query: 612 CNQAYILKFDRNTIIHKVPEEEVEKSLKEKQAVDQQIIASTTDTRNQRRPNEEPSANSSL 671
CNQAY+LKFD++ I ++P +K+ +A D +Q++ +
Sbjct: 120 CNQAYVLKFDQDAEIKRLP-----SVIKDNKA----------DMGSQKQGGKN------- 157
Query: 672 VKLQEP---KESE--GKEEVVCQGIESCKEYIKSFLAAIPIRELQVDIKKGLKSSTPIHH 726
K ++P KESE G+E VVC+G ESC+EYIKSFLAAIPI++++ D+K+GL SS HH
Sbjct: 158 -KYEQPERSKESEEQGEEVVVCRGKESCREYIKSFLAAIPIQQVKADMKEGLVSS--FHH 214
Query: 727 RLQIEFHYIEFSQQR 741
RLQIE +Y + R
Sbjct: 215 RLQIELYYTKHLHHR 229