BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0730.1
(287 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 140 4e-37
AT4G09660.1 | zinc finger MYM-type-like protein | Chr4:6104446-6... 135 8e-36
AT3G29765.1 | General transcription factor 2-related zinc finger... 134 1e-35
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 109 1e-26
AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization... 108 2e-26
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 140 bits (352), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
Query: 10 VYTFREKHNIEVVDLNGSYIVQGRSRKNAQQVRNMYHYHVEIFDAGIDIQLQELNARFTK 69
V +F EK+N ++ + ++ R RK + N++HY V+ F +D+QLQE N RF +
Sbjct: 549 VSSFSEKNNTGMLKMEEEFVDSRRPRKKTG-ITNLHHYKVDCFYTVLDMQLQEFNDRFDE 607
Query: 70 KNAELLRCMACLSPSRGFPLFDKSKLMLLAEFYPSDFRRLETMLLSSQLDNYIYDMRQND 129
N+ELL CM+ LSP F FDKS L+ L EFYP DF +E L QL+ Y+ +++ ++
Sbjct: 608 VNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDNVKNDE 667
Query: 130 DFSNLDGIEALARTLVETKRDKTYHLLYFLITLALTLPAATASVERVFSAMKLTSTT 186
F++L + LAR +VET++ ++ L+Y L+ ++L LP ATA+VER FSAM TT
Sbjct: 668 RFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCFSAMNFVKTT 724
>AT4G09660.1 | zinc finger MYM-type-like protein |
Chr4:6104446-6106607 FORWARD LENGTH=664 | 201606
Length = 664
Score = 135 bits (341), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 10 VYTFREKHNIEVVDLNGSYIVQGRSRKNAQQVRNMYHYHVEIFDAGIDIQLQELNARFTK 69
V +F EK+N ++ + ++ R RK + + N++HY V+ F +D+QLQE N RF +
Sbjct: 493 VSSFSEKNNTAMLKMEEEFVDSRRPRKKSG-ITNLHHYKVDCFYTVLDMQLQEFNDRFDE 551
Query: 70 KNAELLRCMACLSPSRGFPLFDKSKLMLLAEFYPSDFRRLETMLLSSQLDNYIYDMRQND 129
N+ELL CM+ LSP F FDKS L+ L EFYP +F +E L QL+ Y+ +++ ++
Sbjct: 552 VNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPDEFSFVERRSLDHQLEIYLDNVKNDE 611
Query: 130 DFSNLDGIEALARTLVETKRDKTYHLLYFLITLALTLPAATASVERVFSAM 180
F++L LAR +VET++ ++ L+Y L+ L+L LP ATA+VER FSAM
Sbjct: 612 RFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVERCFSAM 662
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 134 bits (337), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Query: 10 VYTFREKHNIEVVDLNGSYIVQGRSRKNAQQVRNMYHYHVEIFDAGIDIQLQELNARFTK 69
V +F EK N ++ + ++ R RK + N++HY V+ F +D+QLQE N F +
Sbjct: 316 VSSFSEKTNTGMLKMEEEFVDSRRPRKKTG-ITNLHHYKVDCFYTVLDMQLQEFNDCFDE 374
Query: 70 KNAELLRCMACLSPSRGFPLFDKSKLMLLAEFYPSDFRRLETMLLSSQLDNYIYDMRQND 129
N+ELL CM+ LSP F FDKS L+ L EFYP DF +E L QL+ Y+ +++ ++
Sbjct: 375 LNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDNVKNDE 434
Query: 130 DFSNLDGIEALARTLVETKRDKTYHLLYFLITLALTLPAATASVERVFSAMKLTSTT 186
F++L+ + LAR +VET++ ++ L+Y L+ L+L LP ATA+V R FSAM TT
Sbjct: 435 RFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCFSAMNFVKTT 491
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 109 bits (272), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 86/131 (65%)
Query: 57 DIQLQELNARFTKKNAELLRCMACLSPSRGFPLFDKSKLMLLAEFYPSDFRRLETMLLSS 116
++ L E N F + N ELL C+A LSP+ F FD+ K+M LAEFYP DF R++ L
Sbjct: 391 EVFLLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEH 450
Query: 117 QLDNYIYDMRQNDDFSNLDGIEALARTLVETKRDKTYHLLYFLITLALTLPAATASVERV 176
QL YI ++R++D F+NL + LAR ++ET++ ++ +Y L+ + LTLP ATA+VER
Sbjct: 451 QLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERC 510
Query: 177 FSAMKLTSTTK 187
FSA + +T +
Sbjct: 511 FSATVVKTTLR 521
>AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=592 | 201606
Length = 592
Score = 108 bits (271), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 86/131 (65%)
Query: 57 DIQLQELNARFTKKNAELLRCMACLSPSRGFPLFDKSKLMLLAEFYPSDFRRLETMLLSS 116
++ L E N F + N ELL C+A LSP+ F FD+ K+M LAEFYP DF R++ L
Sbjct: 419 EVFLLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEH 478
Query: 117 QLDNYIYDMRQNDDFSNLDGIEALARTLVETKRDKTYHLLYFLITLALTLPAATASVERV 176
QL YI ++R++D F+NL + LAR ++ET++ ++ +Y L+ + LTLP ATA+VER
Sbjct: 479 QLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERC 538
Query: 177 FSAMKLTSTTK 187
FSA + +T +
Sbjct: 539 FSATVVKTTLR 549