BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0770.1
(241 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 2e-07
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 4e-07
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 46 6e-06
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 74 ADNKSHQPWRPPAEPYLKINIDASFISLTELAGIGCIMYDYQANFIEAKTNTTRGQ-NAE 132
AD + W PP LK N DAS ++G+G I+ + Q IE +G+ E
Sbjct: 97 ADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTE 156
Query: 133 ECECIANRCAIQWAIDLHISNLHIESDNLNFINHIQDPNRSIQWQSNKHTQEIFNLKANF 192
E EC AIQ + + E DN I + + + Q T I + +F
Sbjct: 157 EAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDT--IQSWIPSF 214
Query: 193 TSIIFTCTPRRNNNQIDSLAKWG-RRHHQNSIWISLPDFLT 232
SI F+ R N D LAK + + Q S++ S P FL+
Sbjct: 215 ESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLS 255
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 60 IKAKSTKLLKASNKADNKSHQPWRPPAEPYLKINIDASFISLTELAGIGCIMYDYQANFI 119
+K K+ +K +++ + W+ P ++K N D S + + +G+ I+ + Q +
Sbjct: 9 VKHKNDDNVKGGQTKSSRTDK-WQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCL 67
Query: 120 EAKTNTTRG-QNAEECECIANRCAIQWAIDLHISNLHIESDNLNFINHIQDPNRSIQWQS 178
+ +G Q +E EC A AIQ A DL + E DN+ I+ N+ +
Sbjct: 68 DCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIR--NKETNPRL 125
Query: 179 NKHTQEIFNLKANFTSIIFTCTPRRNNNQIDSLAKWGRRHHQN-SIWISLPDFLTSI 234
+ + I FT++ FT R N +D LAK +H N +++ P FL S
Sbjct: 126 RYYLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAKKAVANHINHTLYHFCPRFLMSF 182
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 78 SHQPWRPPAEPYLKINIDASFISLTELAGIGCIMYDYQANFIEAKTNTTRG--QNAEECE 135
+HQ W P ++K N D SF T+ G ++ D F + G NA E E
Sbjct: 59 THQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRD-DKGFYKGAAQAVGGTMNNALESE 117
Query: 136 CIANRCAIQWAIDLHISNLHIESDNL---NFINHIQDPNRSIQWQSNKHTQEIFNLKANF 192
A A+Q + E D+ +N Q + W +E ++ F
Sbjct: 118 LQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGAFNW-----IREAWSWSKRF 172
Query: 193 TSIIFTCTPRRNNNQIDSLAK 213
+IF+ TPR NN D LAK
Sbjct: 173 EEVIFSWTPRTNNQPADMLAK 193