BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0810.1
(262 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10360.3 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain c... 306 e-105
AT4G10360.2 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain c... 306 e-105
AT4G10360.1 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain c... 306 e-105
AT4G19645.5 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain c... 258 3e-86
AT4G19645.4 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain c... 258 3e-86
>AT4G10360.3 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain
containing protein | Chr4:6420679-6422108 FORWARD
LENGTH=266 | 201606
Length = 266
Score = 306 bits (783), Expect = e-105, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 187/258 (72%)
Query: 1 MVLKTINDYIGSTNLLIILSILIGILMSRIVYSFTGLISVLYCKSYRNLSKIQKIEWNNR 60
M + + ++ S LL++ SI G LM +IVY T IS L Y L ++EWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 61 GFSSFHAFVSSCAAIYLLLFSNLFNDDAHGVSIVQRNSNFSNITLGISIGYFLLDLGMIL 120
GFS+FHA +S A+IY L+ S+ F+++ HG S++ + S +GIS+GYFL DL MI
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120
Query: 121 WLFPALGGLEYILHHGLSMFALSLSLISGQAQIYILMVLFSESTTPFVNFRWYLDLAGKK 180
W FP LGG+EY+ HH LSMFA+ LS+ SGQ+Q YI +VL SE+TTPFVN RWYLD +G+K
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180
Query: 181 GSKLYIFNGIALFLGWLVARVLWFIFIFTHMFLHYDEVKAIFPLGFYTVLGVPSSLFVMN 240
GSK Y NGIALFLGWLVARVL FIF F HM+LH+ +VK +FPLGFY++L +P +L VMN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240
Query: 241 LYWFWKIVKGLLKTLSKA 258
L WFWKI KGL+KTLSKA
Sbjct: 241 LLWFWKITKGLIKTLSKA 258
>AT4G10360.2 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain
containing protein | Chr4:6420679-6422108 FORWARD
LENGTH=266 | 201606
Length = 266
Score = 306 bits (783), Expect = e-105, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 187/258 (72%)
Query: 1 MVLKTINDYIGSTNLLIILSILIGILMSRIVYSFTGLISVLYCKSYRNLSKIQKIEWNNR 60
M + + ++ S LL++ SI G LM +IVY T IS L Y L ++EWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 61 GFSSFHAFVSSCAAIYLLLFSNLFNDDAHGVSIVQRNSNFSNITLGISIGYFLLDLGMIL 120
GFS+FHA +S A+IY L+ S+ F+++ HG S++ + S +GIS+GYFL DL MI
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120
Query: 121 WLFPALGGLEYILHHGLSMFALSLSLISGQAQIYILMVLFSESTTPFVNFRWYLDLAGKK 180
W FP LGG+EY+ HH LSMFA+ LS+ SGQ+Q YI +VL SE+TTPFVN RWYLD +G+K
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180
Query: 181 GSKLYIFNGIALFLGWLVARVLWFIFIFTHMFLHYDEVKAIFPLGFYTVLGVPSSLFVMN 240
GSK Y NGIALFLGWLVARVL FIF F HM+LH+ +VK +FPLGFY++L +P +L VMN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240
Query: 241 LYWFWKIVKGLLKTLSKA 258
L WFWKI KGL+KTLSKA
Sbjct: 241 LLWFWKITKGLIKTLSKA 258
>AT4G10360.1 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain
containing protein | Chr4:6420679-6422108 FORWARD
LENGTH=266 | 201606
Length = 266
Score = 306 bits (783), Expect = e-105, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 187/258 (72%)
Query: 1 MVLKTINDYIGSTNLLIILSILIGILMSRIVYSFTGLISVLYCKSYRNLSKIQKIEWNNR 60
M + + ++ S LL++ SI G LM +IVY T IS L Y L ++EWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 61 GFSSFHAFVSSCAAIYLLLFSNLFNDDAHGVSIVQRNSNFSNITLGISIGYFLLDLGMIL 120
GFS+FHA +S A+IY L+ S+ F+++ HG S++ + S +GIS+GYFL DL MI
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120
Query: 121 WLFPALGGLEYILHHGLSMFALSLSLISGQAQIYILMVLFSESTTPFVNFRWYLDLAGKK 180
W FP LGG+EY+ HH LSMFA+ LS+ SGQ+Q YI +VL SE+TTPFVN RWYLD +G+K
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180
Query: 181 GSKLYIFNGIALFLGWLVARVLWFIFIFTHMFLHYDEVKAIFPLGFYTVLGVPSSLFVMN 240
GSK Y NGIALFLGWLVARVL FIF F HM+LH+ +VK +FPLGFY++L +P +L VMN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240
Query: 241 LYWFWKIVKGLLKTLSKA 258
L WFWKI KGL+KTLSKA
Sbjct: 241 LLWFWKITKGLIKTLSKA 258
>AT4G19645.5 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain
containing protein | Chr4:10689941-10691298 REVERSE
LENGTH=268 | 201606
Length = 268
Score = 258 bits (659), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 173/253 (68%), Gaps = 1/253 (0%)
Query: 6 INDYIGSTNLLIILSILIGILMSRIVYSFTGLISVLYCKSYRNLSKIQKIEWNNRGFSSF 65
+ Y+ + L S+L+GI + ++VY T L S ++ KSY L+KI++IEWNNRG S+
Sbjct: 14 VEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTV 73
Query: 66 HAFVSSCAAIYLLLFSNLFNDDAHGVSI-VQRNSNFSNITLGISIGYFLLDLGMILWLFP 124
HA S A+Y FS+LF+D ++ V RNS S LG+S+GYFL DLGMI WL+P
Sbjct: 74 HAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLADLGMIFWLYP 133
Query: 125 ALGGLEYILHHGLSMFALSLSLISGQAQIYILMVLFSESTTPFVNFRWYLDLAGKKGSKL 184
+LGG EYILHH LS A++ SL SG+AQ+Y MVL SE TTP +N RWYLD+AG K SK
Sbjct: 134 SLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLDIAGLKRSKA 193
Query: 185 YIFNGIALFLGWLVARVLWFIFIFTHMFLHYDEVKAIFPLGFYTVLGVPSSLFVMNLYWF 244
Y+ NG+A+F WL AR+L FI++F H++ HYD+V + G+ V VP SL VMNL WF
Sbjct: 194 YLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWF 253
Query: 245 WKIVKGLLKTLSK 257
KIVKGL KTL K
Sbjct: 254 GKIVKGLKKTLEK 266
>AT4G19645.4 | TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain
containing protein | Chr4:10689941-10691298 REVERSE
LENGTH=268 | 201606
Length = 268
Score = 258 bits (659), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 173/253 (68%), Gaps = 1/253 (0%)
Query: 6 INDYIGSTNLLIILSILIGILMSRIVYSFTGLISVLYCKSYRNLSKIQKIEWNNRGFSSF 65
+ Y+ + L S+L+GI + ++VY T L S ++ KSY L+KI++IEWNNRG S+
Sbjct: 14 VEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTV 73
Query: 66 HAFVSSCAAIYLLLFSNLFNDDAHGVSI-VQRNSNFSNITLGISIGYFLLDLGMILWLFP 124
HA S A+Y FS+LF+D ++ V RNS S LG+S+GYFL DLGMI WL+P
Sbjct: 74 HAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLADLGMIFWLYP 133
Query: 125 ALGGLEYILHHGLSMFALSLSLISGQAQIYILMVLFSESTTPFVNFRWYLDLAGKKGSKL 184
+LGG EYILHH LS A++ SL SG+AQ+Y MVL SE TTP +N RWYLD+AG K SK
Sbjct: 134 SLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLDIAGLKRSKA 193
Query: 185 YIFNGIALFLGWLVARVLWFIFIFTHMFLHYDEVKAIFPLGFYTVLGVPSSLFVMNLYWF 244
Y+ NG+A+F WL AR+L FI++F H++ HYD+V + G+ V VP SL VMNL WF
Sbjct: 194 YLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWF 253
Query: 245 WKIVKGLLKTLSK 257
KIVKGL KTL K
Sbjct: 254 GKIVKGLKKTLEK 266