BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0830.1
(817 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54220.1 | GRAS family transcription factor | Chr3:20070550-2... 637 0.0
AT5G41920.1 | GRAS family transcription factor | Chr5:16779982-1... 416 e-138
AT1G66350.1 | RGA-like 1 | Chr1:24748327-24749862 FORWARD LENGTH... 231 8e-67
AT1G14920.1 | GRAS family transcription factor family protein | ... 231 1e-66
AT2G01570.1 | GRAS family transcription factor family protein | ... 228 7e-65
>AT3G54220.1 | GRAS family transcription factor |
Chr3:20070550-20072625 FORWARD LENGTH=653 | 201606
Length = 653
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/411 (76%), Positives = 361/411 (87%), Gaps = 6/411 (1%)
Query: 405 QQQNSPPSSSPTPP---LTQPPTPPSTQIIPRDRKEEIRQQKRDEEGLHLLTLLLQCAEA 461
+++NS + P P T P +T R+RKEEI++QK+DEEGLHLLTLLLQCAEA
Sbjct: 241 ERENSSTDAPPQPETVTATVPAVQTNTAEALRERKEEIKRQKQDEEGLHLLTLLLQCAEA 300
Query: 462 VSLDNIDEAKSLLLEISELSTPFGTSAQRVAAYFSEAMTARLVNSRLGMYAPLSNN---H 518
VS DN++EA LLLEIS+LSTP+GTSAQRVAAYFSEAM+ARL+NS LG+YA L +
Sbjct: 301 VSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQ 360
Query: 519 NHNQKISSAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHI 578
H+ K+ SAFQVFNGISP VKFSHFTANQAIQEAFE+E+ VHIIDLDIMQGLQWPGLFHI
Sbjct: 361 THSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHI 420
Query: 579 LASRPGGPPFVRLTGLGTSIEALEATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNI 638
LASRPGGPP VRLTGLGTS+EAL+ATGKRLSDFA+ LGLPFEF P+AEKVGNLD ERLN+
Sbjct: 421 LASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNV 480
Query: 639 SKREAVAVHWLHHSLYDVTGSDSNTLWLLQRIAPKVVTMVEQDLSHAETFLGKFVEAIHY 698
KREAVAVHWL HSLYDVTGSD++TLWLLQR+APKVVT+VEQDLSHA +FLG+FVEAIHY
Sbjct: 481 RKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHY 540
Query: 699 YSALFDSLGASYGEESEERHVVEQQLLAREIKNLLAIGGPSRTGEVKFQNWREKLNQSGF 758
YSALFDSLGASYGEESEERHVVEQQLL++EI+N+LA+GGPSR+GEVKF++WREK+ Q GF
Sbjct: 541 YSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGF 600
Query: 759 RGMPLTGNAATQASLLLGMFPCDGYSLIEENGALKLGWKDLSLFTASAWKP 809
+G+ L GNAATQA+LLLGMFP DGY+L+++NG LKLGWKDLSL TASAW P
Sbjct: 601 KGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTP 651
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 94/159 (59%), Gaps = 32/159 (20%)
Query: 117 NPNPNNSSPNSNPIN---ISTHSTILPSQTNPLTSVASVFPSNFTYLQSSSSSSSNVAPS 173
NP+ NNSS ++ S ++T+ P Q LT+ A+V SS P
Sbjct: 55 NPDYNNSSRPPRRVSHLLDSNYNTVTPQQPPSLTAAATV--------------SSQPNPP 100
Query: 174 LPAVCNFSGLPLFPSEDNRIGSGTIQSVVQNSSSSSQMDDNSAT-----TAWIDGIIKDL 228
L +VC FSGLP+FPS +R G + SV MD +S++ T W+D II+DL
Sbjct: 101 L-SVCGFSGLPVFPS--DRGGRNVMMSV-------QPMDQDSSSSSASPTVWVDAIIRDL 150
Query: 229 IQGSTNVSIPQLVQNVREIIHPCNPNLASLLEYRLRSLM 267
I ST+VSIPQL+QNVR+II PCNPNL +LLEYRLRSLM
Sbjct: 151 IHSSTSVSIPQLIQNVRDIIFPCNPNLGALLEYRLRSLM 189
>AT5G41920.1 | GRAS family transcription factor |
Chr5:16779982-16781199 FORWARD LENGTH=405 | 201606
Length = 405
Score = 416 bits (1070), Expect = e-138, Method: Compositional matrix adjust.
Identities = 210/384 (54%), Positives = 281/384 (73%), Gaps = 14/384 (3%)
Query: 435 RKEEIRQQKRDEEG---LHLLTLLLQCAEAVSLDNIDEAKSLLLEISELSTPFGTSAQRV 491
R+ E ++ + +G + LL+LLLQCAE V+ D++ EA +LL EISE+ +PFG+S +RV
Sbjct: 21 RRIEFPEETLENDGAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERV 80
Query: 492 AAYFSEAMTARLVNSRL-GMYAPLSNN---HNHNQKISSAFQVFNGISPFVKFSHFTANQ 547
AYF++A+ R+++S L G +PLS +QKI SA Q +N +SP +KFSHFTANQ
Sbjct: 81 VAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQ 140
Query: 548 AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTSIEALEATGKR 607
AI +A + E+ VHIIDLD+MQGLQWP LFHILASRP +R+TG G+S + L +TG+R
Sbjct: 141 AIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRR 200
Query: 608 LSDFAETLGLPFEFFPVAEKVGNL-DPERLNISKREAVAVHWLHHSLYDVTGSDSNTLWL 666
L+DFA +L LPFEF P+ +GNL DP +L + EAV VHW+ H LYDVTG++ TL +
Sbjct: 201 LADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEI 260
Query: 667 LQRIAPKVVTMVEQDLSHAE--TFLGKFVEAIHYYSALFDSLGASYGEESEERHVVEQQL 724
L+R+ P ++T+VEQ+LS+ + +FLG+FVEA+HYYSALFD+LG GEES ER VEQ +
Sbjct: 261 LRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIV 320
Query: 725 LAREIKNLLAIGGPSRTGEVKFQNWREKLNQSGFRGMPLTGNAATQASLLLGMFPCDGYS 784
L EI+N++A GG G K W+E+L++ GFR + L GN ATQA LLLGM P +GY+
Sbjct: 321 LGTEIRNIVAHGG----GRRKRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYT 376
Query: 785 LIEENGALKLGWKDLSLFTASAWK 808
L+EENG L+LGWKDLSL TASAWK
Sbjct: 377 LVEENGTLRLGWKDLSLLTASAWK 400
>AT1G66350.1 | RGA-like 1 | Chr1:24748327-24749862 FORWARD
LENGTH=511 | 201606
Length = 511
Score = 231 bits (589), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 220/409 (53%), Gaps = 38/409 (9%)
Query: 426 PSTQIIPRDRKEEIRQQKR------------------DEEGLHLLTLLLQCAEAVSLDNI 467
P + + PRD + R+ KR E G+ L+ LL CAEAV +N+
Sbjct: 110 PGSAVYPRD-EHVTRRSKRTRIESELSSTRSVVVLDSQETGVRLVHALLACAEAVQQNNL 168
Query: 468 DEAKSLLLEISELSTPFGTSAQRVAAYFSEAMTARLVNSRLGMYAPLSNNHNHNQKISSA 527
A +L+ + L++ + ++VA YF+E + R+ Y + S
Sbjct: 169 KLADALVKHVGLLASSQAGAMRKVATYFAEGLARRI-------YRIYPRDDVALSSFSDT 221
Query: 528 FQV-FNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGP 586
Q+ F P++KF+HFTANQAI E F E+VH+IDL + GLQWP L LA RP GP
Sbjct: 222 LQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGP 281
Query: 587 PFVRLTGLGTSIEALEATGKRLSDFAETLGLPFEFFPVA-EKVGNLDPERLNIS-KREAV 644
P RLTG+G S+ ++ G +L A T+G+ FEF +A + +L PE L+I E+V
Sbjct: 282 PDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESV 341
Query: 645 AVHWLH--HSLYDVTGSDSNTLWLLQRIAPKVVTMVEQDLSHAET-FLGKFVEAIHYYSA 701
AV+ + H L GS L ++ I P ++T+VEQ+ +H T FL +F E++HYYS+
Sbjct: 342 AVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSS 401
Query: 702 LFDSLGASYGEESEERHVVEQQLLAREIKNLLAIGGPSRTGEVKFQN-WREKLNQSGFRG 760
LFDSL G S++R V+ + L R+I NL+A G R + N WR + GF+
Sbjct: 402 LFDSLE---GPPSQDR-VMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKP 457
Query: 761 MPLTGNAATQASLLLGMFP-CDGYSLIEENGALKLGWKDLSLFTASAWK 808
+ + NA QAS+LL ++ DGY++ E G L LGW+ L SAW+
Sbjct: 458 VSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
>AT1G14920.1 | GRAS family transcription factor family protein |
Chr1:5149414-5151015 FORWARD LENGTH=533 | 201606
Length = 533
Score = 231 bits (590), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 217/376 (57%), Gaps = 23/376 (6%)
Query: 446 EEGLHLLTLLLQCAEAVSLDNIDEAKSLLLEISELSTPFGTSAQRVAAYFSEAMTARLVN 505
E G+ L+ LL CAEAV +N+ A++L+ +I L+ + ++VA YF+EA+ R+
Sbjct: 164 ENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIY- 222
Query: 506 SRLGMYAPLSNNHNHNQKISSAFQV-FNGISPFVKFSHFTANQAIQEAFEREERVHIIDL 564
RL +P + +H+ +S Q+ F P++KF+HFTANQAI EAF+ ++RVH+ID
Sbjct: 223 -RL---SPSQSPIDHS--LSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDF 276
Query: 565 DIMQGLQWPGLFHILASRPGGPPFVRLTGLG----TSIEALEATGKRLSDFAETLGLPFE 620
+ QGLQWP L LA RPGGPP RLTG+G + + L G +L+ AE + + FE
Sbjct: 277 SMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFE 336
Query: 621 FFP-VAEKVGNLDPERLNI--SKREAVAVHWLH--HSLYDVTGSDSNTLWLLQRIAPKVV 675
+ VA + +LD L + S+ E+VAV+ + H L G+ L ++ +I P++
Sbjct: 337 YRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIF 396
Query: 676 TMVEQDLSH-AETFLGKFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLAREIKNLLA 734
T+VEQ+ +H + FL +F E++HYYS LFDSL G S + V+ + L ++I N++A
Sbjct: 397 TVVEQESNHNSPIFLDRFTESLHYYSTLFDSL---EGVPSGQDKVMSEVYLGKQICNVVA 453
Query: 735 IGGPSRTGEVK-FQNWREKLNQSGFRGMPLTGNAATQASLLLGMF-PCDGYSLIEENGAL 792
GP R + WR + +GF + NA QAS+LL +F +GY + E +G L
Sbjct: 454 CDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCL 513
Query: 793 KLGWKDLSLFTASAWK 808
LGW L SAWK
Sbjct: 514 MLGWHTRPLIATSAWK 529
>AT2G01570.1 | GRAS family transcription factor family protein |
Chr2:255581-257344 REVERSE LENGTH=587 | 201606
Length = 587
Score = 228 bits (581), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 210/376 (55%), Gaps = 23/376 (6%)
Query: 446 EEGLHLLTLLLQCAEAVSLDNIDEAKSLLLEISELSTPFGTSAQRVAAYFSEAMTARLVN 505
E G+ L+ L+ CAEA+ +N+ A++L+ +I L+ + ++VA YF+EA+ R+
Sbjct: 216 ENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIY- 274
Query: 506 SRLGMYAPLSNNHNHNQKISSAFQV-FNGISPFVKFSHFTANQAIQEAFEREERVHIIDL 564
RL +P N +H +S Q+ F P++KF+HFTANQAI EAFE ++RVH+ID
Sbjct: 275 -RL---SPPQNQIDHC--LSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDF 328
Query: 565 DIMQGLQWPGLFHILASRPGGPPFVRLTGLG----TSIEALEATGKRLSDFAETLGLPFE 620
+ QGLQWP L LA R GGPP RLTG+G + + L G +L+ AE + + FE
Sbjct: 329 SMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFE 388
Query: 621 FFP-VAEKVGNLDPERLNI--SKREAVAVHWLH--HSLYDVTGSDSNTLWLLQRIAPKVV 675
+ VA + +LD L + S EAVAV+ + H L G L ++++I P +
Sbjct: 389 YRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIF 448
Query: 676 TMVEQDLSH-AETFLGKFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLAREIKNLLA 734
T+VEQ+ +H FL +F E++HYYS LFDSL G + + V+ + L ++I NL+A
Sbjct: 449 TVVEQESNHNGPVFLDRFTESLHYYSTLFDSL---EGVPNSQDKVMSEVYLGKQICNLVA 505
Query: 735 IGGPSRTGEVK-FQNWREKLNQSGFRGMPLTGNAATQASLLLGMF-PCDGYSLIEENGAL 792
GP R + W + SG L NA QAS+LL +F GY + E NG L
Sbjct: 506 CEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCL 565
Query: 793 KLGWKDLSLFTASAWK 808
LGW L T SAWK
Sbjct: 566 MLGWHTRPLITTSAWK 581