BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0840.1
(217 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 59 5e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 55 9e-09
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 33 WEALQTISPSQP---TPCLVIGDLNTIMYPSDKNG--PPKPLPNKAKQIVSIIHEMGLHD 87
W+ + +S S P +P LV+GD N I ++ P + + + + + L D
Sbjct: 105 WDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVD 164
Query: 88 LGFSGSPFTWSNRQFHGNLIQERLDRALANLPWLSSFPYSRIRHLQGVGSDHLP--ILLS 145
L G +TWSN Q N I +LDRA+ N WL++FP + SDH ++L+
Sbjct: 165 LPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILN 223
Query: 146 TNPPSSLSTKPFKFIRTWMSHPTCKNFILDNW 177
+PP S K FK+ +HP + IL W
Sbjct: 224 NSPPLS-KKKSFKYFSFLSTHPDFISSILAAW 254
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 48 LVIGDLNTIMYPSDKNGPPK-PLPNKA-KQIVSIIHEMGLHDLGFSGSPFTWSNRQFHGN 105
+++GD + I SD + +P + ++ + + + L D+ G +TWSN Q N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280
Query: 106 LIQERLDRALANLPWLSSFPYS-RIRHLQGVGSDHLPILLSTNPPSSLSTKPFKFIRTWM 164
I +LDRA+AN W SSFP + + L GV SDH P ++ S K F++
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLS 339
Query: 165 SHPTCKNFILDNWN----VNSYLIQQKLNQLAIK--LSQWNKTVFGHVEQKIKN 212
+HPT + W V S++ + A K N+ FG+++ K K
Sbjct: 340 THPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKE 393