BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g0840.1
         (217 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1...    59   5e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    55   9e-09

>AT1G40390.1 | DNAse I-like superfamily protein |
           Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
          Length = 426

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 33  WEALQTISPSQP---TPCLVIGDLNTIMYPSDKNG--PPKPLPNKAKQIVSIIHEMGLHD 87
           W+ +  +S S P   +P LV+GD N I   ++     P        + + + + +  L D
Sbjct: 105 WDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVD 164

Query: 88  LGFSGSPFTWSNRQFHGNLIQERLDRALANLPWLSSFPYSRIRHLQGVGSDHLP--ILLS 145
           L   G  +TWSN Q   N I  +LDRA+ N  WL++FP +         SDH    ++L+
Sbjct: 165 LPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILN 223

Query: 146 TNPPSSLSTKPFKFIRTWMSHPTCKNFILDNW 177
            +PP S   K FK+     +HP   + IL  W
Sbjct: 224 NSPPLS-KKKSFKYFSFLSTHPDFISSILAAW 254


>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 48  LVIGDLNTIMYPSDKNGPPK-PLPNKA-KQIVSIIHEMGLHDLGFSGSPFTWSNRQFHGN 105
           +++GD + I   SD     +  +P +  ++  + + +  L D+   G  +TWSN Q   N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280

Query: 106 LIQERLDRALANLPWLSSFPYS-RIRHLQGVGSDHLPILLSTNPPSSLSTKPFKFIRTWM 164
            I  +LDRA+AN  W SSFP +  +  L GV SDH P ++        S K F++     
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLS 339

Query: 165 SHPTCKNFILDNWN----VNSYLIQQKLNQLAIK--LSQWNKTVFGHVEQKIKN 212
           +HPT    +   W     V S++     +  A K      N+  FG+++ K K 
Sbjct: 340 THPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKE 393


Top